Lucas Gravley
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0e5f996c3c
|
look at folders and not file names
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2020-09-08 12:16:59 -05:00 |
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Lucas Gravley
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a0d4012b67
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like this?
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2020-09-08 12:01:17 -05:00 |
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Lucas Gravley
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53995952e0
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Merge branch 'master' into just-filter-the-git-folder
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2020-09-08 10:43:59 -05:00 |
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Lukas Gravley
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1d46677b4f
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Merge pull request #689 from kpj/master
Add `snakemake --lint`/`snakefmt` support to super-linter
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2020-09-08 10:31:19 -05:00 |
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Lukas Gravley
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134cd1f032
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Merge pull request #695 from github/primetheus/pylint-import-error
added import-error to the pylint disable rules
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2020-09-08 10:26:22 -05:00 |
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Lucas Gravley
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b9aedb4dee
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fix lock
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2020-09-08 10:07:58 -05:00 |
|
Lucas Gravley
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20c0ebf419
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fix lock
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2020-09-08 10:04:29 -05:00 |
|
Lucas Gravley
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a6c9656015
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fixing vars
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2020-09-08 09:47:57 -05:00 |
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Lukas Gravley
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1928fa613a
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Merge pull request #683 from github/source-label
Add org.opencontainers.image.source LABEL to Dockerfile
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2020-09-08 09:24:47 -05:00 |
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Lukas Gravley
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95d153605a
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Merge pull request #687 from github/dependabot/npm_and_yarn/dependencies/eslint-plugin-jest-24.0.0
Bump eslint-plugin-jest from 23.20.0 to 24.0.0 in /dependencies
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2020-09-08 09:24:01 -05:00 |
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Lukas Gravley
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9cd5ddc1ea
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Merge pull request #688 from github/dependabot/pip/dependencies/yq-2.11.0
Bump yq from 2.10.1 to 2.11.0 in /dependencies
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2020-09-08 09:23:48 -05:00 |
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Lukas Gravley
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bb979f72dd
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Merge pull request #690 from github/dependabot/docker/golangci/golangci-lint-v1.31.0
Bump golangci/golangci-lint from v1.30.0 to v1.31.0
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2020-09-08 09:23:34 -05:00 |
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Lukas Gravley
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11244b1b6a
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Merge pull request #691 from github/dependabot/npm_and_yarn/dependencies/npm-groovy-lint-7.6.1
Bump npm-groovy-lint from 7.5.4 to 7.6.1 in /dependencies
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2020-09-08 09:23:20 -05:00 |
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kpj
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6f6e6e9d03
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[Snakemake] Remove wrong function argument
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2020-09-08 11:26:48 +02:00 |
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kpj
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581f07a32b
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[Snakemake] Fix 'LINTER_NAME'
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2020-09-08 10:19:56 +02:00 |
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kpj
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3762abecb7
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[Snakemake] Install extra psutil dependency (linux-headers)
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2020-09-08 10:02:44 +02:00 |
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kpj
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8ac1c99a2e
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[Snakemake] Support both formatting using 'snakefmt' and linting using 'snakemake --lint'
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2020-09-08 09:38:48 +02:00 |
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kpj
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ad262196ba
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[Snakemake] Also lint 'Snakefile' (without '.smk' suffix)
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2020-09-08 09:11:54 +02:00 |
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dependabot[bot]
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901645f649
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Bump npm-groovy-lint from 7.5.4 to 7.6.1 in /dependencies
Bumps [npm-groovy-lint](https://github.com/nvuillam/npm-groovy-lint) from 7.5.4 to 7.6.1.
- [Release notes](https://github.com/nvuillam/npm-groovy-lint/releases)
- [Changelog](https://github.com/nvuillam/npm-groovy-lint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/nvuillam/npm-groovy-lint/compare/v7.5.4...v7.6.1)
Signed-off-by: dependabot[bot] <support@github.com>
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2020-09-08 05:41:33 +00:00 |
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dependabot[bot]
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8cd7dfabd7
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Bump golangci/golangci-lint from v1.30.0 to v1.31.0
Bumps golangci/golangci-lint from v1.30.0 to v1.31.0.
Signed-off-by: dependabot[bot] <support@github.com>
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2020-09-08 05:40:49 +00:00 |
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kpj
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53f551c8b0
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[Snakemake] Add '--config' parameter to 'snakefmt' calls
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2020-09-07 17:26:58 +02:00 |
|
kpj
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0c5029bf67
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[Snakemake] Actually run 'snakefmt' tests
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2020-09-07 17:20:56 +02:00 |
|
kpj
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2d7ba8d26b
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[Snakemake] Add 'snakefmt' to dependencies
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2020-09-07 17:12:44 +02:00 |
|
kpj
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34e9e57419
|
[Snakemake] Add another issue to bad test case
|
2020-09-07 17:01:19 +02:00 |
|
kpj
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ea5d4aa2a1
|
[Snakemake] Update test cases
|
2020-09-07 16:55:06 +02:00 |
|
kpj
|
1e453be7fa
|
[Snakemake] Update codebase
|
2020-09-07 16:49:07 +02:00 |
|
kpj
|
15eec55117
|
[Snakemake] Update documentation
|
2020-09-07 16:37:22 +02:00 |
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dependabot[bot]
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8e85f7e8c0
|
Bump yq from 2.10.1 to 2.11.0 in /dependencies
Bumps [yq](https://github.com/kislyuk/yq) from 2.10.1 to 2.11.0.
- [Release notes](https://github.com/kislyuk/yq/releases)
- [Changelog](https://github.com/kislyuk/yq/blob/develop/Changes.rst)
- [Commits](https://github.com/kislyuk/yq/compare/v2.10.1...v2.11.0)
Signed-off-by: dependabot[bot] <support@github.com>
|
2020-09-07 05:24:29 +00:00 |
|
dependabot[bot]
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f7e6c9c504
|
Bump eslint-plugin-jest from 23.20.0 to 24.0.0 in /dependencies
Bumps [eslint-plugin-jest](https://github.com/jest-community/eslint-plugin-jest) from 23.20.0 to 24.0.0.
- [Release notes](https://github.com/jest-community/eslint-plugin-jest/releases)
- [Changelog](https://github.com/jest-community/eslint-plugin-jest/blob/master/CHANGELOG.md)
- [Commits](https://github.com/jest-community/eslint-plugin-jest/compare/v23.20.0...v24.0.0)
Signed-off-by: dependabot[bot] <support@github.com>
|
2020-09-07 05:23:45 +00:00 |
|
NicolasVuillamy
|
0dba19167d
|
Fix readme
|
2020-09-05 13:08:35 +02:00 |
|
NicolasVuillamy
|
17d09ffc02
|
Add README index
|
2020-09-05 12:55:55 +02:00 |
|
NicolasVuillamy
|
cdfa861984
|
Documentation
|
2020-09-05 12:43:30 +02:00 |
|
NicolasVuillamy
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04c93b4ff5
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Add management of FILTER_REGEX_INCLUDE and FILTER_REGEX_EXCLUDE options
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2020-09-05 12:25:44 +02:00 |
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Bryan Clark
|
c92bc10b8e
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Add org.opencontainers.image.source LABEL
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2020-09-04 14:43:37 -07:00 |
|
Zack Koppert
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a171005856
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Merge pull request #681 from Goryudyuma/fix-pull_request-template-for-lint
Update pull_request-template.md
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2020-09-04 14:13:47 -07:00 |
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Goryudyuma(Kei.Matsumoto)
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a2b751d503
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Update pull_request-template.md
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2020-09-05 03:32:19 +09:00 |
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Lukas Gravley
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828de134a9
|
this should be right
|
2020-09-04 13:22:01 -05:00 |
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Goryudyuma(Kei.Matsumoto)
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b31b696e00
|
Just filter the .git folder
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2020-09-05 03:08:26 +09:00 |
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Lukas Gravley
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fc938bdc0b
|
Merge pull request #674 from leviem1/use-ghcr
Move to GitHub Container Registry
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2020-09-04 12:23:35 -05:00 |
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Lucas Gravley
|
9d2624c0e1
|
Adding more
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2020-09-04 10:54:31 -05:00 |
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Lukas Gravley
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c58bab2627
|
Merge pull request #677 from v1v/feature/version
Print version, date and revision
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2020-09-04 10:35:38 -05:00 |
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Lucas Gravley
|
b29eb851d3
|
make pretty
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2020-09-04 10:14:47 -05:00 |
|
Lucas Gravley
|
cd74d80762
|
adding some cleanup
|
2020-09-04 09:52:04 -05:00 |
|
Lukas Gravley
|
a3fcb3ea7c
|
Merge pull request #675 from dmerrick/honoring-disable-errors
Making MULTI_STATUS honor DISABLE_ERRORS setting
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2020-09-04 09:15:06 -05:00 |
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Lukas Gravley
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a961b77f71
|
Merge pull request #678 from nvuillam/master
Groovy traps .nf extension (nextflow) + upgrade npm-groovy-lint
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2020-09-04 09:12:34 -05:00 |
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Lukas Gravley
|
eb36fb7d7c
|
Merge branch 'master' into master
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2020-09-04 08:53:34 -05:00 |
|
Lukas Gravley
|
241b6cb10c
|
Merge pull request #676 from github/dependabot/npm_and_yarn/dependencies/npm-groovy-lint-7.5.3
Bump npm-groovy-lint from 7.5.1 to 7.5.3 in /dependencies
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2020-09-04 08:48:22 -05:00 |
|
Jared Murrell
|
0680dd9969
|
added import-error to the pylint disable rules
|
2020-09-04 09:22:06 -04:00 |
|
NicolasVuillamy
|
21d75fb89e
|
Groovy traps .nf extension (nextflow) + upgrade npm-groovy-lint
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2020-09-04 11:54:31 +02:00 |
|
Victor Martinez
|
7380bad950
|
Validate docker labels in the DEV workflow
|
2020-09-04 10:26:13 +01:00 |
|