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27 commits

Author SHA1 Message Date
dependabot[bot]
61139b43b6
deps(python): bump snakefmt in /dependencies/python (#5632) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.10.1 to 0.10.2.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/v0.10.1...v0.10.2)

---
updated-dependencies:
- dependency-name: snakefmt
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-05-13 13:36:51 +00:00
dependabot[bot]
8b76d91fb3
deps(python): bump snakefmt in /dependencies/python (#5526) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.10.0 to 0.10.1.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/v0.10.0...v0.10.1)

---
updated-dependencies:
- dependency-name: snakefmt
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-04-17 13:33:39 +00:00
dependabot[bot]
924b19397a
deps(python): bump snakefmt from 0.9.0 to 0.10.0 in /dependencies/python (#5236) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.9.0 to 0.10.0.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/v0.9.0...v0.10.0)

---
updated-dependencies:
- dependency-name: snakefmt
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-02-05 17:26:38 +00:00
dependabot[bot]
507f148ede
deps(python): bump snakefmt from 0.8.5 to 0.9.0 in /dependencies/python (#5142) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.8.5 to 0.9.0.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/v0.8.5...v0.9.0)

---
updated-dependencies:
- dependency-name: snakefmt
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-01-15 14:36:27 +00:00
dependabot[bot]
a1be060607
Bump snakefmt from 0.8.4 to 0.8.5 in /dependencies/python (#4820) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.8.4 to 0.8.5.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/v0.8.4...v0.8.5)

---
updated-dependencies:
- dependency-name: snakefmt
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-10-31 17:35:55 +00:00
Marco Ferrari
9ee2eed763
Simplify pip requirements files (#4796) 2023-10-27 23:07:51 +00:00
dependabot[bot]
67d756cf51
Bump pathspec from 0.11.1 to 0.11.2 in /dependencies/python (#4706) 
Bumps [pathspec](https://github.com/cpburnz/python-pathspec) from 0.11.1 to 0.11.2.
- [Release notes](https://github.com/cpburnz/python-pathspec/releases)
- [Changelog](https://github.com/cpburnz/python-pathspec/blob/master/CHANGES.rst)
- [Commits](https://github.com/cpburnz/python-pathspec/compare/v0.11.1...v0.11.2)

---
updated-dependencies:
- dependency-name: pathspec
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-10-27 00:24:30 +00:00
dependabot[bot]
b0d1acee1f
Bump packaging from 23.1 to 23.2 in /dependencies/python (#4743) 
Bumps [packaging](https://github.com/pypa/packaging) from 23.1 to 23.2.
- [Release notes](https://github.com/pypa/packaging/releases)
- [Changelog](https://github.com/pypa/packaging/blob/main/CHANGELOG.rst)
- [Commits](https://github.com/pypa/packaging/compare/23.1...23.2)

---
updated-dependencies:
- dependency-name: packaging
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-10-17 16:17:31 +00:00
dependabot[bot]
8a89630159
Bump platformdirs from 3.2.0 to 3.5.1 in /dependencies/python (#4200) 
Bumps [platformdirs](https://github.com/platformdirs/platformdirs) from 3.2.0 to 3.5.1.
- [Release notes](https://github.com/platformdirs/platformdirs/releases)
- [Changelog](https://github.com/platformdirs/platformdirs/blob/main/CHANGES.rst)
- [Commits](https://github.com/platformdirs/platformdirs/compare/3.2.0...3.5.1)

---
updated-dependencies:
- dependency-name: platformdirs
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-05-23 12:39:48 -07:00
Super-Linter Automation
024514974a Update Python dependencies 2023-04-16 22:23:13 -04:00
Super-Linter Automation
21a606688b Update Python dependencies 2023-04-10 14:51:50 -04:00
Super-Linter Automation
70bb091689 Update Python dependencies 2023-01-03 11:31:26 -05:00
Super-Linter Automation
f5f9a755e7 Update Python dependencies 2022-12-20 11:01:54 -05:00
github-actions[bot]
4e5b33defa
Update Python dependencies (#3425) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-10-10 12:35:54 -05:00
github-actions[bot]
4afd71e176
Update Python dependencies (#3348) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
Co-authored-by: Marco Ferrari <ferrari.marco@gmail.com>
 2022-09-26 13:48:52 -05:00
github-actions[bot]
da1c6a1cff
Update Python dependencies (#3167) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-07-25 08:29:37 -05:00
github-actions[bot]
8c67cfdae6
Update Python dependencies (#3102) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-07-06 13:07:24 -05:00
dependabot[bot]
7c7c4e9dea
Bump snakefmt from 0.6.0 to 0.6.1 in /dependencies/python (#3030) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.6.0 to 0.6.1.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/v0.6.0...0.6.1)

---
updated-dependencies:
- dependency-name: snakefmt
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2022-06-13 14:30:09 -05:00
github-actions[bot]
651cff3720
Update Python dependencies (#2852) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-05-02 09:22:46 -05:00
dependabot[bot]
65d1435da5
Bump platformdirs from 2.5.1 to 2.5.2 in /dependencies/python (#2797) 
Bumps [platformdirs](https://github.com/platformdirs/platformdirs) from 2.5.1 to 2.5.2.
- [Release notes](https://github.com/platformdirs/platformdirs/releases)
- [Changelog](https://github.com/platformdirs/platformdirs/blob/main/CHANGES.rst)
- [Commits](https://github.com/platformdirs/platformdirs/compare/2.5.1...2.5.2)

---
updated-dependencies:
- dependency-name: platformdirs
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2022-04-20 11:11:24 -07:00
dependabot[bot]
427dabfefa
Bump typing-extensions from 4.1.1 to 4.2.0 in /dependencies/python (#2796) 
Bumps [typing-extensions](https://github.com/python/typing) from 4.1.1 to 4.2.0.
- [Release notes](https://github.com/python/typing/releases)
- [Changelog](https://github.com/python/typing/blob/master/typing_extensions/CHANGELOG)
- [Commits](https://github.com/python/typing/compare/4.1.1...4.2.0)

---
updated-dependencies:
- dependency-name: typing-extensions
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2022-04-20 10:28:57 -07:00
Super-Linter Automation
401a175228 Update Python dependencies 2022-04-04 09:32:17 -04:00
Super-Linter Automation
71957137ef Update Python dependencies 2022-03-07 10:32:23 -05:00
github-actions[bot]
069df12b17
Update Python dependencies (#2546) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-02-22 11:21:32 -06:00
dependabot[bot]
b0aff67e71
Bump platformdirs from 2.5.0 to 2.5.1 in /dependencies/python (#2531) 
Bumps [platformdirs](https://github.com/platformdirs/platformdirs) from 2.5.0 to 2.5.1.
- [Release notes](https://github.com/platformdirs/platformdirs/releases)
- [Changelog](https://github.com/platformdirs/platformdirs/blob/main/CHANGES.rst)
- [Commits](https://github.com/platformdirs/platformdirs/compare/2.5.0...2.5.1)

---
updated-dependencies:
- dependency-name: platformdirs
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2022-02-22 08:57:55 -06:00
Brett Logan
892e5ab2ec Update deps 2022-02-14 13:39:05 -05:00
Jameel Al-Aziz
7e1683407d Update Dependabot for python virtual envs 
* Simplify virtualenv installation to use multiple requirements files in
  a single directory. This eliminates the packages.txt file and provides
  an easier path to adding new tools in the future. It also allows us to
  simplify the dependenabot configuration as all requirements files are
  in a single directory.
* Update dependabot.yml to point to the new Python dependencies folder.
 2022-01-11 10:05:56 -05:00
Renamed from dependencies/python/snakefmt/requirements.txt (Browse further)