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2068 commits 14 branches 136 tags 133 MiB
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203 commits

Author SHA1 Message Date
Lukas Gravley
7943ce1f54
break out: (#990) 
* break out:

* fix it

* fix source

* add them exports

* more path

* more path
 2020-11-12 11:27:34 -06:00
Lucas Gravley
874f0d9ebc quoting powershell files 2020-11-10 11:23:15 -06:00
Lucas Gravley
c243939985 fix space 2020-11-06 13:28:37 -06:00
Lucas Gravley
4eae14fbe2 fix tap 2020-11-06 13:12:17 -06:00
Marco Ferrari
301afc458a Fix command output echo text 2020-11-04 14:18:45 +01:00
Marco Ferrari
5be174d8d9 Fix FILE_STATUS for Dockerfiles 2020-10-24 16:13:16 +02:00
Gabo
874475eb70 Fix test case workspace_path 2020-10-19 14:05:38 -05:00
Marco Ferrari
fcce194d34 Merge TestCodebase and LintCodebase 
Change-Id: I9a044fefe96e400b8e3320842b53fe97af2a7b40
 2020-10-17 16:12:55 +02:00
Marco Ferrari
4452bff800 Fix rules files for JAVASCRIPT_ES and TYPESCRIPT_ES when testing 2020-10-15 16:45:18 +02:00
Lukas Gravley
ed588b80c1
Merge pull request #846 from github/tekton 
Adding tekton language support
 2020-10-13 16:37:11 -05:00
Lucas Gravley
8be7c6df85 remove cache folder 2020-10-13 14:17:40 -05:00
Lucas Gravley
d8b13b0fd8 now with files 2020-10-13 10:21:23 -05:00
Tim Jones
a8746a7159 Add support for Terragrunt files 2020-10-08 18:18:22 +02:00
Marco Ferrari
68e15659b8 Centralize file list building logic in buildFileList.sh 2020-10-07 16:36:49 +02:00
Marco Ferrari
973bfdea8e Initialize all log-related ASAP 2020-09-29 22:46:24 +02:00
Lukas Gravley
84c79a186b
Merge branch 'master' into master 2020-09-22 08:56:09 -05:00
Marco Ferrari
f24f52be11 Lint with Kubeval and fixes 2020-09-22 01:49:01 +02:00
Marco Ferrari
6168112f61 Fix ERROR_ON_MISSING_EXEC_BIT initialization 2020-09-21 14:43:44 +02:00
kpj
6f6004275f In anticipation of snakefmt 0.1.6, start using --check and --compact-diff 2020-09-18 16:32:01 +02:00
Marco Ferrari
5cefb9209f Make bash-exec errors or warnings configurable 2020-09-15 22:40:12 +02:00
NicolasVuillamy
e470df5431 Fix file filters: Reorder arguments to LintCodeBase function 2020-09-15 08:15:53 +02:00
Lukas Gravley
79b055babe
Merge pull request #707 from ferrarimarco/fix-node-modules 
Fix list files function typos
 2020-09-10 11:21:54 -05:00
Lucas Gravley
b232c5b970 this is the way./.. 2020-09-10 10:34:04 -05:00
Marco Ferrari
ad9c0081f4 Fix list files function typos 2020-09-10 12:10:12 +02:00
NicolasVuillamy
27afc50d60 Set GROOVY Linter failure level to warning 2020-09-10 11:07:05 +02:00
NicolasVuillamy
f072bc5c8d Merge remote-tracking branch 'github/master' 2020-09-09 20:18:21 +02:00
Lucas Gravley
b5d42bf181 this makes no sense 2020-09-09 10:37:02 -05:00
Lucas Gravley
880380d118 if i could only read 2020-09-09 10:18:12 -05:00
Lucas Gravley
dbd4cd673d this has to be right 2020-09-09 10:04:21 -05:00
Lucas Gravley
eb67d9b9c6 fix that dumb action 2020-09-09 09:28:39 -05:00
Lucas Gravley
bae75b456b more fix 2020-09-09 09:24:57 -05:00
Lucas Gravley
17c3ded695 i forgot how this works 2020-09-09 09:24:27 -05:00
Lukas Gravley
e9811c85d6
Update lib/worker.sh 
yes

Co-authored-by: Goryudyuma(Kei.Matsumoto) <6211370+Goryudyuma@users.noreply.github.com>
 2020-09-08 16:00:12 -05:00
Lucas Gravley
fd42f4b3fb science... 2020-09-08 15:45:17 -05:00
Lucas Gravley
0e5f996c3c look at folders and not file names 2020-09-08 12:16:59 -05:00
Lucas Gravley
a0d4012b67 like this? 2020-09-08 12:01:17 -05:00
Lucas Gravley
53995952e0 Merge branch 'master' into just-filter-the-git-folder 2020-09-08 10:43:59 -05:00
kpj
581f07a32b [Snakemake] Fix 'LINTER_NAME' 2020-09-08 10:19:56 +02:00
kpj
8ac1c99a2e [Snakemake] Support both formatting using 'snakefmt' and linting using 'snakemake --lint' 2020-09-08 09:38:48 +02:00
kpj
53f551c8b0 [Snakemake] Add '--config' parameter to 'snakefmt' calls 2020-09-07 17:26:58 +02:00
kpj
0c5029bf67 [Snakemake] Actually run 'snakefmt' tests 2020-09-07 17:20:56 +02:00
NicolasVuillamy
04c93b4ff5 Add management of FILTER_REGEX_INCLUDE and FILTER_REGEX_EXCLUDE options 2020-09-05 12:25:44 +02:00
Lukas Gravley
828de134a9
this should be right 2020-09-04 13:22:01 -05:00
Goryudyuma(Kei.Matsumoto)
b31b696e00
Just filter the .git folder 2020-09-05 03:08:26 +09:00
NicolasVuillamy
21d75fb89e Groovy traps .nf extension (nextflow) + upgrade npm-groovy-lint 2020-09-04 11:54:31 +02:00
Lukas Gravley
b012d72952
Merge pull request #662 from montyly/dev-black-config-file 
Add support for black config file
 2020-09-02 09:57:44 -05:00
Lucas Gravley
a756e40157 typo 2020-09-02 09:07:39 -05:00
Lucas Gravley
6040030c8a Adding more paths to ignore 2020-09-02 09:05:36 -05:00
Josselin
f34b084586 Add support for black config file 2020-09-02 11:28:57 +02:00
Marco Ferrari
30763f2575 Streamline shell file list building 2020-08-31 23:47:48 +02:00