#!/usr/bin/env bash

function IssueHintForFullGitHistory() {
  info "Check that the local repository has the full history and that the repository is not shallow."
  info "See https://github.com/super-linter/super-linter#get-started"
  info "Is shallow repository: $(git -C "${GITHUB_WORKSPACE}" rev-parse --is-shallow-repository)"
}

function GenerateFileDiff() {
  DIFF_GIT_DEFAULT_BRANCH_CMD="git -C \"${GITHUB_WORKSPACE}\" diff --diff-filter=d --name-only ${DEFAULT_BRANCH}...${GITHUB_SHA} | xargs -I % sh -c 'echo \"${GITHUB_WORKSPACE}/%\"' 2>&1"
  DIFF_TREE_CMD="git -C \"${GITHUB_WORKSPACE}\" diff-tree --no-commit-id --name-only -r ${GITHUB_SHA} ${GITHUB_BEFORE_SHA} | xargs -I % sh -c 'echo \"${GITHUB_WORKSPACE}/%\"' 2>&1"

  if [ "${GITHUB_EVENT_NAME:-}" == "push" ]; then
    RunFileDiffCommand "${DIFF_TREE_CMD}"
    if [ ${#RAW_FILE_ARRAY[@]} -eq 0 ]; then
      debug "----------------------------------------------"
      debug "Generating the file array with diff-tree produced [0] items, trying with git diff against the default branch..."
      RunFileDiffCommand "${DIFF_GIT_DEFAULT_BRANCH_CMD}"
    fi
  else
    RunFileDiffCommand "${DIFF_GIT_DEFAULT_BRANCH_CMD}"
  fi
}

function RunFileDiffCommand() {
  CMD="${1}"
  debug "Generating Diff with:[$CMD]"

  #################################################
  # Get the Array of files changed in the commits #
  #################################################
  CMD_OUTPUT=$(eval "set -eo pipefail; $CMD; set +eo pipefail")
  ERROR_CODE=$?
  debug "Diff command return code: ${ERROR_CODE}"

  ##############################
  # Check the shell for errors #
  ##############################
  if [ ${ERROR_CODE} -ne 0 ]; then
    error "Failed to get Diff with:[$CMD]"
    IssueHintForFullGitHistory
    fatal "[Diff command output: ${CMD_OUTPUT}]"
  fi

  ###################################################
  # Map command output to an array to proper handle #
  ###################################################
  mapfile -t RAW_FILE_ARRAY < <(echo -n "$CMD_OUTPUT")
  debug "RAW_FILE_ARRAY contents: ${RAW_FILE_ARRAY[*]}"
}

function BuildFileList() {
  debug "Building file list..."

  VALIDATE_ALL_CODEBASE="${1}"
  debug "VALIDATE_ALL_CODEBASE: ${VALIDATE_ALL_CODEBASE}"

  TEST_CASE_RUN="${2}"
  debug "TEST_CASE_RUN: ${TEST_CASE_RUN}"

  if [ "${VALIDATE_ALL_CODEBASE}" == "false" ] && [ "${TEST_CASE_RUN}" != "true" ]; then
    debug "----------------------------------------------"
    debug "Build the list of all changed files"

    GenerateFileDiff
  else
    WORKSPACE_PATH="${GITHUB_WORKSPACE}"
    if [ "${TEST_CASE_RUN}" == "true" ]; then
      WORKSPACE_PATH="${GITHUB_WORKSPACE}/${TEST_CASE_FOLDER}"
    fi

    if [ "${USE_FIND_ALGORITHM}" == 'true' ]; then
      debug "----------------------------------------------"
      debug "Populating the file list with all the files in the ${WORKSPACE_PATH} workspace using FIND algorithm"
      mapfile -t RAW_FILE_ARRAY < <(find "${WORKSPACE_PATH}" \
        -not \( -path '*/\.git' -prune \) \
        -not \( -path '*/\.pytest_cache' -prune \) \
        -not \( -path '*/\.rbenv' -prune \) \
        -not \( -path '*/\.terragrunt-cache' -prune \) \
        -not \( -path '*/\.venv' -prune \) \
        -not \( -path '*/\__pycache__' -prune \) \
        -not \( -path '*/\node_modules' -prune \) \
        -not -name ".DS_Store" \
        -not -name "*.gif" \
        -not -name "*.ico" \
        -not -name "*.jpg" \
        -not -name "*.jpeg" \
        -not -name "*.pdf" \
        -not -name "*.png" \
        -not -name "*.webp" \
        -not -name "*.woff" \
        -not -name "*.woff2" \
        -not -name "*.zip" \
        -type f \
        2>&1 | sort)
    else
      debug "----------------------------------------------"
      DIFF_GIT_VALIDATE_ALL_CODEBASE="git -C \"${WORKSPACE_PATH}\" ls-tree -r --name-only HEAD | xargs -I % sh -c \"echo ${WORKSPACE_PATH}/%\" 2>&1"
      debug "Populating the file list with: ${DIFF_GIT_VALIDATE_ALL_CODEBASE}"
      mapfile -t RAW_FILE_ARRAY < <(eval "set -eo pipefail; ${DIFF_GIT_VALIDATE_ALL_CODEBASE}; set +eo pipefail")
      debug "RAW_FILE_ARRAY contents: ${RAW_FILE_ARRAY[*]}"
    fi
  fi

  ERROR_CODE=$?
  if [ ${ERROR_CODE} -ne 0 ]; then
    fatal "Failed to gain a list of all files changed! Error code: ${ERROR_CODE}"
  fi

  if [ ${#RAW_FILE_ARRAY[@]} -eq 0 ]; then
    warn "No files were found in the GITHUB_WORKSPACE:[${GITHUB_WORKSPACE}] to lint!"
  fi

  ####################################################
  # Configure linters that scan the entire workspace #
  ####################################################
  debug "Checking if we are in test mode before configuring the list of directories to lint"
  if [ "${TEST_CASE_RUN}" == "true" ]; then
    debug "We are running in test mode."

    debug "Adding test case directories to the list of directories to analyze with ansible-lint."
    DEFAULT_ANSIBLE_TEST_CASE_DIRECTORY="${GITHUB_WORKSPACE}/${TEST_CASE_FOLDER}/ansible"
    debug "DEFAULT_ANSIBLE_TEST_CASE_DIRECTORY: ${DEFAULT_ANSIBLE_TEST_CASE_DIRECTORY}"
    FILE_ARRAY_ANSIBLE+=("${DEFAULT_ANSIBLE_TEST_CASE_DIRECTORY}/bad")
    FILE_ARRAY_ANSIBLE+=("${DEFAULT_ANSIBLE_TEST_CASE_DIRECTORY}/good")

    debug "Adding test case directories to the list of directories to analyze with Checkov."
    DEFAULT_CHECKOV_TEST_CASE_DIRECTORY="${GITHUB_WORKSPACE}/${TEST_CASE_FOLDER}/checkov"
    debug "DEFAULT_CHECKOV_TEST_CASE_DIRECTORY: ${DEFAULT_CHECKOV_TEST_CASE_DIRECTORY}"
    FILE_ARRAY_CHECKOV+=("${DEFAULT_CHECKOV_TEST_CASE_DIRECTORY}/bad")
    FILE_ARRAY_CHECKOV+=("${DEFAULT_CHECKOV_TEST_CASE_DIRECTORY}/good")

    debug "Adding test case directories to the list of directories to analyze with Gitleaks."
    DEFAULT_GITLEAKS_TEST_CASE_DIRECTORY="${GITHUB_WORKSPACE}/${TEST_CASE_FOLDER}/gitleaks"
    debug "DEFAULT_GITLEAKS_TEST_CASE_DIRECTORY: ${DEFAULT_GITLEAKS_TEST_CASE_DIRECTORY}"
    FILE_ARRAY_GITLEAKS+=("${DEFAULT_GITLEAKS_TEST_CASE_DIRECTORY}/bad")
    FILE_ARRAY_GITLEAKS+=("${DEFAULT_GITLEAKS_TEST_CASE_DIRECTORY}/good")

    debug "Adding test case directories to the list of directories to analyze with Checkov."
    DEFAULT_JSCPD_TEST_CASE_DIRECTORY="${GITHUB_WORKSPACE}/${TEST_CASE_FOLDER}/jscpd"
    debug "DEFAULT_JSCPD_TEST_CASE_DIRECTORY: ${DEFAULT_JSCPD_TEST_CASE_DIRECTORY}"
    FILE_ARRAY_JSCPD+=("${DEFAULT_JSCPD_TEST_CASE_DIRECTORY}/bad")
    FILE_ARRAY_JSCPD+=("${DEFAULT_JSCPD_TEST_CASE_DIRECTORY}/good")
  else
    debug "We are not running in test mode (${TEST_CASE_RUN})."

    if [ -d "${ANSIBLE_DIRECTORY}" ]; then
      debug "Adding ANSIBLE_DIRECTORY (${ANSIBLE_DIRECTORY}) to the list of files and directories to lint."
      FILE_ARRAY_ANSIBLE+=("${ANSIBLE_DIRECTORY}")
    else
      debug "ANSIBLE_DIRECTORY (${ANSIBLE_DIRECTORY}) does NOT exist."
    fi

    if CheckovConfigurationFileContainsDirectoryOption "${CHECKOV_LINTER_RULES}"; then
      debug "No need to configure the directories to check for Checkov."
    else
      debug "Adding ${GITHUB_WORKSPACE} to the list of directories to analyze with Checkov."
      FILE_ARRAY_CHECKOV+=("${GITHUB_WORKSPACE}")
    fi

    debug "Adding ${GITHUB_WORKSPACE} to the list of directories to analyze with Gitleaks."
    FILE_ARRAY_GITLEAKS+=("${GITHUB_WORKSPACE}")

    debug "Adding ${GITHUB_WORKSPACE} to the list of directories to analyze with JSCPD."
    FILE_ARRAY_JSCPD+=("${GITHUB_WORKSPACE}")
  fi

  if CheckovConfigurationFileContainsDirectoryOption "${CHECKOV_LINTER_RULES}"; then
    debug "No need to configure the directories to check for Checkov."
  else
    debug "Checking if we are in test mode before configuring the list of directories to lint with Checkov"
    if [ "${TEST_CASE_RUN}" == "true" ]; then
      debug "We are running in test mode. Adding test case directories to the list of directories to analyze with Checkov."
      FILE_ARRAY_CHECKOV+=("${DEFAULT_CHECKOV_TEST_CASE_DIRECTORY}/bad")
      FILE_ARRAY_CHECKOV+=("${DEFAULT_CHECKOV_TEST_CASE_DIRECTORY}/good")
    else
      debug "We are not running in test mode (${TEST_CASE_RUN}). Adding ${GITHUB_WORKSPACE} to the list of directories to analyze with Checkov."
      FILE_ARRAY_CHECKOV+=("${GITHUB_WORKSPACE}")
    fi
  fi

  ################################################
  # Iterate through the array of all files found #
  ################################################
  info "---------------------------------"
  info "------ File list to check: ------"
  info "---------------------------------"
  for FILE in "${RAW_FILE_ARRAY[@]}"; do
    # Get the file extension
    FILE_TYPE="$(GetFileExtension "$FILE")"
    # Get the name of the file (lowercase) and the containing directory path
    BASE_FILE=$(basename "${FILE,,}")
    FILE_DIR_NAME="$(dirname "${FILE}")"

    debug "FILE: ${FILE}, FILE_TYPE: ${FILE_TYPE}, BASE_FILE: ${BASE_FILE}, FILE_DIR_NAME: ${FILE_DIR_NAME}"

    if [ ! -f "${FILE}" ]; then
      # File not found in workspace
      warn "File:{$FILE} existed in commit data, but not found on file system, skipping..."
      continue
    fi

    ########################################################
    # Don't include test cases if not running in test mode #
    ########################################################
    if [[ ${FILE} == *"${TEST_CASE_FOLDER}"* ]] && [ "${TEST_CASE_RUN}" != "true" ]; then
      debug "TEST_CASE_RUN (${TEST_CASE_RUN}) is not true. Skipping ${FILE}..."
      continue
    ##################################################
    # Include test cases if not running in test mode #
    ##################################################
    elif [[ ${FILE} != *"${TEST_CASE_FOLDER}"* ]] && [ "${TEST_CASE_RUN}" == "true" ]; then
      debug "TEST_CASE_RUN (${TEST_CASE_RUN}) is true. Skipping ${FILE}..."
    fi

    ###############################################
    # Filter files if FILTER_REGEX_INCLUDE is set #
    ###############################################
    if [[ -n "$FILTER_REGEX_INCLUDE" ]] && [[ ! (${FILE} =~ $FILTER_REGEX_INCLUDE) ]]; then
      debug "FILTER_REGEX_INCLUDE didn't match. Skipping ${FILE}"
      continue
    fi

    ###############################################
    # Filter files if FILTER_REGEX_EXCLUDE is set #
    ###############################################
    if [[ -n "$FILTER_REGEX_EXCLUDE" ]] && [[ ${FILE} =~ $FILTER_REGEX_EXCLUDE ]]; then
      debug "FILTER_REGEX_EXCLUDE match. Skipping ${FILE}"
      continue
    fi

    ###################################################
    # Filter files if FILTER_REGEX_EXCLUDE is not set #
    ###################################################
    if [ "${IGNORE_GITIGNORED_FILES}" == "true" ] && git -C "${GITHUB_WORKSPACE}" check-ignore "$FILE"; then
      debug "${FILE} is ignored by Git. Skipping ${FILE}"
      continue
    fi

    #########################################
    # Filter files with at-generated marker #
    #########################################
    if [ "${IGNORE_GENERATED_FILES}" == "true" ] && IsGenerated "$FILE"; then
      debug "${FILE} is generated. Skipping ${FILE}"
      continue
    fi

    # Editorconfig-checker should check every file
    FILE_ARRAY_EDITORCONFIG+=("${FILE}")

    # See https://docs.renovatebot.com/configuration-options/
    if [[ "${BASE_FILE}" =~ renovate.json5? ]] ||
      [ "${BASE_FILE}" == ".renovaterc" ] || [[ "${BASE_FILE}" =~ .renovaterc.json5? ]]; then
      FILE_ARRAY_RENOVATE+=("${FILE}")
    fi

    # See https://docs.renovatebot.com/config-presets/
    IFS="," read -r -a RENOVATE_SHAREABLE_CONFIG_PRESET_FILE_NAMES_ARRAY <<<"${RENOVATE_SHAREABLE_CONFIG_PRESET_FILE_NAMES}"
    for file_name in "${RENOVATE_SHAREABLE_CONFIG_PRESET_FILE_NAMES_ARRAY[@]}"; do
      if [ "${BASE_FILE}" == "${file_name}" ]; then
        FILE_ARRAY_RENOVATE+=("${FILE}")
        break
      fi
    done

    if [ "${BASE_FILE}" == "go.mod" ]; then
      debug "Found ${FILE}. Checking if individual Go file linting is enabled as well."
      if [ "${VALIDATE_GO}" == "true" ]; then
        debug "Checking if we are running tests. TEST_CASE_RUN: ${TEST_CASE_RUN}"
        if [ "${TEST_CASE_RUN}" == "true" ]; then
          debug "Skipping the failure due to individual Go files and Go modules linting being enabled at the same time because we're in test mode."
        else
          fatal "Set VALIDATE_GO to false to avoid false positives due to analyzing Go files in the ${FILE_DIR_NAME} directory individually instead of considering them in the context of a Go module."
        fi
      else
        debug "Considering ${FILE_DIR_NAME} as a Go module."
      fi
      FILE_ARRAY_GO_MODULES+=("${FILE_DIR_NAME}")
    fi

    #######################
    # Get the shell files #
    #######################
    if IsValidShellScript "${FILE}"; then
      FILE_ARRAY_BASH+=("${FILE}")
      FILE_ARRAY_BASH_EXEC+=("${FILE}")
      FILE_ARRAY_SHELL_SHFMT+=("${FILE}")

    #########################
    # Get the CLOJURE files #
    #########################
    elif [ "${FILE_TYPE}" == "clj" ] || [ "${FILE_TYPE}" == "cljs" ] ||
      [ "${FILE_TYPE}" == "cljc" ] || [ "${FILE_TYPE}" == "edn" ]; then
      FILE_ARRAY_CLOJURE+=("${FILE}")
    #####################
    # Get the C++ files #
    #####################
    elif [ "${FILE_TYPE}" == "cpp" ] || [ "${FILE_TYPE}" == "h" ] ||
      [ "${FILE_TYPE}" == "cc" ] || [ "${FILE_TYPE}" == "hpp" ] ||
      [ "${FILE_TYPE}" == "cxx" ] || [ "${FILE_TYPE}" == "cu" ] ||
      [ "${FILE_TYPE}" == "hxx" ] || [ "${FILE_TYPE}" == "c++" ] ||
      [ "${FILE_TYPE}" == "hh" ] || [ "${FILE_TYPE}" == "h++" ] ||
      [ "${FILE_TYPE}" == "cuh" ] || [ "${FILE_TYPE}" == "c" ]; then
      FILE_ARRAY_CPP+=("${FILE}")
      FILE_ARRAY_CLANG_FORMAT+=("${FILE}")

    ########################
    # Get the COFFEE files #
    ########################
    elif [ "${FILE_TYPE}" == "coffee" ]; then
      FILE_ARRAY_COFFEESCRIPT+=("${FILE}")

    ########################
    # Get the CSHARP files #
    ########################
    elif [ "${FILE_TYPE}" == "cs" ]; then
      FILE_ARRAY_CSHARP+=("${FILE}")

    #####################
    # Get the CSS files #
    #####################
    elif [ "${FILE_TYPE}" == "css" ] || [ "${FILE_TYPE}" == "scss" ] ||
      [ "${FILE_TYPE}" == "sass" ]; then
      FILE_ARRAY_CSS+=("${FILE}")

    ######################
    # Get the DART files #
    ######################
    elif [ "${FILE_TYPE}" == "dart" ]; then
      FILE_ARRAY_DART+=("${FILE}")

    ########################
    # Get the DOCKER files #
    ########################
    # Use BASE_FILE here because FILE_TYPE is not reliable when there is no file extension
    elif [[ "${FILE_TYPE}" != "tap" ]] && [[ "${FILE_TYPE}" != "yml" ]] &&
      [[ "${FILE_TYPE}" != "yaml" ]] && [[ "${FILE_TYPE}" != "json" ]] &&
      [[ "${FILE_TYPE}" != "xml" ]] &&
      [[ "${BASE_FILE}" =~ ^(.+\.)?(contain|dock)erfile$ ]]; then
      FILE_ARRAY_DOCKERFILE_HADOLINT+=("${FILE}")

    #####################
    # Get the ENV files #
    #####################
    elif [ "${FILE_TYPE}" == "env" ] || [[ "${BASE_FILE}" == *".env."* ]]; then
      FILE_ARRAY_ENV+=("${FILE}")

    #########################
    # Get the Gherkin files #
    #########################
    elif [ "${FILE_TYPE}" == "feature" ]; then
      FILE_ARRAY_GHERKIN+=("${FILE}")

    ########################
    # Get the Golang files #
    ########################
    elif [ "${FILE_TYPE}" == "go" ]; then
      FILE_ARRAY_GO+=("${FILE}")

    ########################
    # Get the GROOVY files #
    ########################
    # Use BASE_FILE here because FILE_TYPE is not reliable when there is no file extension
    elif [ "$FILE_TYPE" == "groovy" ] || [ "$FILE_TYPE" == "jenkinsfile" ] ||
      [ "$FILE_TYPE" == "gradle" ] || [ "$FILE_TYPE" == "nf" ] ||
      [[ "$BASE_FILE" =~ .*jenkinsfile.* ]]; then
      FILE_ARRAY_GROOVY+=("$FILE")

    ######################
    # Get the HTML files #
    ######################
    elif [ "${FILE_TYPE}" == "html" ]; then
      FILE_ARRAY_HTML+=("${FILE}")

    ######################
    # Get the Java files #
    ######################
    elif [ "${FILE_TYPE}" == "java" ]; then
      FILE_ARRAY_JAVA+=("${FILE}")
      FILE_ARRAY_GOOGLE_JAVA_FORMAT+=("${FILE}")

    ############################
    # Get the JavaScript files #
    ############################
    elif [ "${FILE_TYPE}" == "js" ]; then
      FILE_ARRAY_JAVASCRIPT_ES+=("${FILE}")
      FILE_ARRAY_JAVASCRIPT_STANDARD+=("${FILE}")
      FILE_ARRAY_JAVASCRIPT_PRETTIER+=("${FILE}")

    #######################
    # Get the JSONC files #
    #######################
    elif [ "$FILE_TYPE" == "jsonc" ] || [ "$FILE_TYPE" == "json5" ]; then
      FILE_ARRAY_JSONC+=("${FILE}")

    ######################
    # Get the JSON files #
    ######################
    elif [ "${FILE_TYPE}" == "json" ]; then
      FILE_ARRAY_JSON+=("${FILE}")

      ############################
      # Check if file is OpenAPI #
      ############################
      if DetectOpenAPIFile "${FILE}"; then
        FILE_ARRAY_OPENAPI+=("${FILE}")
      fi
      ########################
      # Check if file is ARM #
      ########################
      if DetectARMFile "${FILE}"; then
        FILE_ARRAY_ARM+=("${FILE}")
      fi
      #####################################
      # Check if the file is CFN template #
      #####################################
      if DetectCloudFormationFile "${FILE}"; then
        FILE_ARRAY_CLOUDFORMATION+=("${FILE}")
      fi
      ############################################
      # Check if the file is AWS States Language #
      ############################################
      if DetectAWSStatesFIle "${FILE}"; then
        FILE_ARRAY_STATES+=("${FILE}")
      fi

    #####################
    # Get the JSX files #
    #####################
    elif [ "${FILE_TYPE}" == "jsx" ]; then
      FILE_ARRAY_JSX+=("${FILE}")

    ########################
    # Get the KOTLIN files #
    ########################
    elif [ "${FILE_TYPE}" == "kt" ] || [ "${FILE_TYPE}" == "kts" ]; then
      FILE_ARRAY_KOTLIN+=("${FILE}")

    #####################
    # Get the LUA files #
    #####################
    elif [ "$FILE_TYPE" == "lua" ]; then
      FILE_ARRAY_LUA+=("$FILE")

    #######################
    # Get the LaTeX files #
    #######################
    elif [ "${FILE_TYPE}" == "tex" ]; then
      FILE_ARRAY_LATEX+=("${FILE}")

    ##########################
    # Get the MARKDOWN files #
    ##########################
    elif [ "${FILE_TYPE}" == "md" ]; then
      FILE_ARRAY_MARKDOWN+=("${FILE}")
      FILE_ARRAY_NATURAL_LANGUAGE+=("${FILE}")

    ######################
    # Get the PHP files #
    ######################
    elif [ "${FILE_TYPE}" == "php" ]; then
      FILE_ARRAY_PHP_BUILTIN+=("${FILE}")
      FILE_ARRAY_PHP_PHPCS+=("${FILE}")
      FILE_ARRAY_PHP_PHPSTAN+=("${FILE}")
      FILE_ARRAY_PHP_PSALM+=("${FILE}")

    ######################
    # Get the PERL files #
    ######################
    elif [ "${FILE_TYPE}" == "pl" ] || [ "${FILE_TYPE}" == "pm" ] ||
      [ "${FILE_TYPE}" == "t" ]; then
      FILE_ARRAY_PERL+=("${FILE}")

    ############################
    # Get the Powershell files #
    ############################
    elif [ "${FILE_TYPE}" == "ps1" ] ||
      [ "${FILE_TYPE}" == "psm1" ] ||
      [ "${FILE_TYPE}" == "psd1" ] ||
      [ "${FILE_TYPE}" == "ps1xml" ] ||
      [ "${FILE_TYPE}" == "pssc" ] ||
      [ "${FILE_TYPE}" == "psrc" ] ||
      [ "${FILE_TYPE}" == "cdxml" ]; then
      FILE_ARRAY_POWERSHELL+=("${FILE}")

    #################################
    # Get the PROTOCOL BUFFER files #
    #################################
    elif [ "${FILE_TYPE}" == "proto" ]; then
      FILE_ARRAY_PROTOBUF+=("${FILE}")

    ########################
    # Get the PYTHON files #
    ########################
    elif [ "${FILE_TYPE}" == "py" ]; then
      FILE_ARRAY_PYTHON_BLACK+=("${FILE}")
      FILE_ARRAY_PYTHON_FLAKE8+=("${FILE}")
      FILE_ARRAY_PYTHON_ISORT+=("${FILE}")
      FILE_ARRAY_PYTHON_PYLINT+=("${FILE}")
      FILE_ARRAY_PYTHON_MYPY+=("${FILE}")

    ######################
    # Get the RAKU files #
    ######################
    elif [ "${FILE_TYPE}" == "raku" ] || [ "${FILE_TYPE}" == "rakumod" ] ||
      [ "${FILE_TYPE}" == "rakutest" ] || [ "${FILE_TYPE}" == "pm6" ] ||
      [ "${FILE_TYPE}" == "pl6" ] || [ "${FILE_TYPE}" == "p6" ]; then
      FILE_ARRAY_RAKU+=("${FILE}")

    ####################
    # Get the R files  #
    ####################
    elif [ "${FILE_TYPE}" == "r" ] || [ "${FILE_TYPE}" == "rmd" ]; then
      FILE_ARRAY_R+=("${FILE}")

    ######################
    # Get the RUBY files #
    ######################
    elif [ "${FILE_TYPE}" == "rb" ]; then
      FILE_ARRAY_RUBY+=("${FILE}")

    ######################
    # Get the RUST files #
    ######################
    elif [ "${FILE_TYPE}" == "rs" ]; then
      FILE_ARRAY_RUST_2015+=("${FILE}")
      FILE_ARRAY_RUST_2018+=("${FILE}")
      FILE_ARRAY_RUST_2021+=("${FILE}")

    #######################
    # Get the RUST crates #
    #######################
    elif [ "${BASE_FILE}" == "cargo.toml" ]; then
      ###############################################
      # Append the crate manifest file to the array #
      ###############################################
      FILE_ARRAY_RUST_CLIPPY+=("${FILE}")

    ###########################
    # Get the SCALA files #
    ###########################
    elif [ "${FILE_TYPE}" == "scala" ] || [ "${FILE_TYPE}" == "sc" ] || [ "${BASE_FILE}" == "??????" ]; then
      FILE_ARRAY_SCALAFMT+=("${FILE}")

    ###########################
    # Get the SNAKEMAKE files #
    ###########################
    elif [ "${FILE_TYPE}" == "smk" ] || [ "${BASE_FILE}" == "snakefile" ]; then
      FILE_ARRAY_SNAKEMAKE_LINT+=("${FILE}")
      FILE_ARRAY_SNAKEMAKE_SNAKEFMT+=("${FILE}")

    #####################
    # Get the SQL files #
    #####################
    elif [ "${FILE_TYPE}" == "sql" ]; then
      FILE_ARRAY_SQL+=("${FILE}")
      FILE_ARRAY_SQLFLUFF+=("${FILE}")

    ###########################
    # Get the Terraform files #
    ###########################
    elif [ "${FILE_TYPE}" == "tf" ]; then
      FILE_ARRAY_TERRAFORM_TFLINT+=("${FILE}")
      FILE_ARRAY_TERRAFORM_TERRASCAN+=("${FILE}")
      FILE_ARRAY_TERRAFORM_FMT+=("${FILE}")

    ############################
    # Get the Terragrunt files #
    ############################
    elif [ "${FILE_TYPE}" == "hcl" ] && [[ ${FILE} != *".tflint.hcl"* ]] && [[ ${FILE} != *".pkr.hcl"* ]]; then
      FILE_ARRAY_TERRAGRUNT+=("${FILE}")

    ############################
    # Get the TypeScript files #
    ############################
    elif [ "${FILE_TYPE}" == "ts" ]; then
      FILE_ARRAY_TYPESCRIPT_ES+=("${FILE}")
      FILE_ARRAY_TYPESCRIPT_STANDARD+=("${FILE}")
      FILE_ARRAY_TYPESCRIPT_PRETTIER+=("${FILE}")

    #####################
    # Get the TSX files #
    #####################
    elif [ "${FILE_TYPE}" == "tsx" ]; then
      FILE_ARRAY_TSX+=("${FILE}")
    elif [ "${FILE_TYPE}" == "txt" ]; then
      FILE_ARRAY_NATURAL_LANGUAGE+=("${FILE}")

    #####################
    # Get the XML files #
    #####################
    elif [ "${FILE_TYPE}" == "xml" ]; then
      FILE_ARRAY_XML+=("${FILE}")

    ################################
    # Get the CLOUDFORMATION files #
    ################################
    elif [ "${FILE_TYPE}" == "yml" ] || [ "${FILE_TYPE}" == "yaml" ]; then
      FILE_ARRAY_YAML+=("${FILE}")

      ###################################
      # Check if file is GitHub Actions #
      ###################################
      if DetectActions "${FILE}"; then
        FILE_ARRAY_GITHUB_ACTIONS+=("${FILE}")
      fi

      #####################################
      # Check if the file is CFN template #
      #####################################
      if DetectCloudFormationFile "${FILE}"; then
        FILE_ARRAY_CLOUDFORMATION+=("${FILE}")
      fi

      ############################
      # Check if file is OpenAPI #
      ############################
      if DetectOpenAPIFile "${FILE}"; then
        FILE_ARRAY_OPENAPI+=("${FILE}")
      fi

      ########################################
      # Check if the file is Tekton template #
      ########################################
      if DetectTektonFile "${FILE}"; then
        FILE_ARRAY_TEKTON+=("${FILE}")
      fi

      ############################################
      # Check if the file is Kubernetes template #
      ############################################
      if DetectKubernetesFile "${FILE}"; then
        FILE_ARRAY_KUBERNETES_KUBECONFORM+=("${FILE}")
      fi
    ########################################################################
    # We have something that we need to try to check file type another way #
    ########################################################################
    else
      ##############################################
      # Use file to see if we can parse what it is #
      ##############################################
      CheckFileType "${FILE}"
    fi
    ##########################################
    # Print line break after each file debug #
    ##########################################
    debug ""
  done

  ################
  # Footer print #
  ################
  info "----------------------------------------------"
  info "Successfully gathered list of files..."
}