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817 commits

Author SHA1 Message Date
Lucas Gravley
95d85d4dc2 fix it 2020-11-06 08:26:15 -06:00
Marco Ferrari
7862654394 Fix editorconfig-checker errors 2020-11-05 23:21:41 +01:00
Marco Ferrari
0778feaf42 Fix dotdirs exclusion 2020-11-05 17:48:56 +01:00
Lucas Gravley
995e2fc6bf fix find 2020-11-04 12:52:07 -06:00
Marco Ferrari
301afc458a Fix command output echo text 2020-11-04 14:18:45 +01:00
Marco Ferrari
aca43d0206 Fix SC2128 2020-11-04 10:26:09 +01:00
Marco Ferrari
c0441b2844 Use the already-defined linter names array to print linter versions 2020-11-04 10:26:05 +01:00
Lucas Gravley
2c9f8b1aa2 fixing logic 2020-11-03 10:06:33 -06:00
Marco Ferrari
3911130038 Fail on errors while getting linter versions 2020-11-02 21:54:26 +01:00
Lukas Gravley
5a04bd9875
Merge pull request #927 from github/fix-secondary-rules-file 
Don't override the secondary rules file path if available, don't reuse dirty values from previous iterations when loading rules files
 2020-11-02 08:58:06 -06:00
Lucas Gravley
3c911cfe99 make fatal 2020-11-02 07:46:58 -06:00
Gabo
95ca6f0006 Fix shellchekc for linter versions 2020-10-30 20:43:54 -05:00
Gabo
cc5556514f Fix shellcheck 2020-10-30 20:27:20 -05:00
Gabo
f826ac73c5 Validation should be inside container 2020-10-30 19:57:35 -05:00
Gabo
291489d6d9 Fix logging level for automation scripts 2020-10-30 19:09:54 -05:00
Gabo
e4b007cd40 Move validation to build time 2020-10-30 15:06:12 -05:00
Gabo
87036c3987 Better pswh module validation 2020-10-30 14:16:21 -05:00
Lukas Gravley
7f15e7a441
Merge branch 'master' into fix-secondary-rules-file 2020-10-30 10:25:58 -05:00
Marco Ferrari
e2f45db57d Initialize the LANGUAGE_LINTER_RULES value to avoid using leftovers from the previous iteration 2020-10-30 12:47:09 +01:00
Marco Ferrari
888bc7524e Don't override the secondary rules file path, if available 2020-10-30 12:15:16 +01:00
Gabo
997cfdcb02 Add notice warn and error log levels 2020-10-28 19:08:01 -05:00
Lucas Gravley
dbffb46526 adding tests 2020-10-28 10:22:55 -05:00
Lukas Gravley
18915fe6a9
Merge pull request #905 from IvanKuchin/IvanKuchin-bugfix#900 
bugfix: #900
 2020-10-27 13:47:22 -05:00
IvanKuchin
98a0a194ad
Update buildFileList.sh 
fix syntax issue to pass bash linter
 2020-10-24 14:46:30 -04:00
Marco Ferrari
5be174d8d9 Fix FILE_STATUS for Dockerfiles 2020-10-24 16:13:16 +02:00
IvanKuchin
ab3f02fe26
bugfix: #900 2020-10-23 12:16:14 -04:00
Ahmad Nassri
0396b9189b
fix: correct env variable name for JSX command (#890) 
fixes #889
 2020-10-23 09:17:25 +02:00
Gabo
ae8b16dac5 Fix tap test for dynamic tests 2020-10-19 20:46:14 -05:00
Gabo
3772bb9a03 Fix test case workspace_path in build file list 2020-10-19 16:15:04 -05:00
Lukas Gravley
4053087930
Merge pull request #882 from wrux/master 
Fixed typo in missing linter rule fatal error.
 2020-10-19 14:47:06 -05:00
Callum
abb0901e2e
Fixed typo in missing linter rules. 2020-10-19 21:16:33 +02:00
Gabo
874475eb70 Fix test case workspace_path 2020-10-19 14:05:38 -05:00
Marco Ferrari
fcce194d34 Merge TestCodebase and LintCodebase 
Change-Id: I9a044fefe96e400b8e3320842b53fe97af2a7b40
 2020-10-17 16:12:55 +02:00
Marco Ferrari
4452bff800 Fix rules files for JAVASCRIPT_ES and TYPESCRIPT_ES when testing 2020-10-15 16:45:18 +02:00
Marco Ferrari
5e25d5dcae Print linter commands 2020-10-15 16:45:18 +02:00
Marco Ferrari
2a4c89e92f Export LANGUAGE_LINTER_RULES 2020-10-15 16:45:18 +02:00
Marco Ferrari
fdb14fc19c Print environment variables before running linters 2020-10-15 16:45:18 +02:00
Marco Ferrari
df79a85546 Print environment variables before running linters 2020-10-15 16:45:18 +02:00
Marco Ferrari
4507a8e056 Add a debug instructions to check LANGUAGE_LINTER_RULES 2020-10-15 16:45:18 +02:00
Marco Ferrari
dfaeaf317d Simplify rules files loading, plus fixes 2020-10-15 16:45:18 +02:00
Lucas Gravley
d9b3473867 add warning: 2020-10-14 10:31:55 -05:00
Lukas Gravley
ed588b80c1
Merge pull request #846 from github/tekton 
Adding tekton language support
 2020-10-13 16:37:11 -05:00
Lucas Gravley
8be7c6df85 remove cache folder 2020-10-13 14:17:40 -05:00
Lucas Gravley
7a775854e7 cleaner 2020-10-13 13:46:46 -05:00
Lucas Gravley
c3a1403fa0 fix tekton to not trigger kuber 2020-10-13 12:54:14 -05:00
Lucas Gravley
d8b13b0fd8 now with files 2020-10-13 10:21:23 -05:00
Marco Ferrari
c201c0f6d1 Dynamically invoke linters 2020-10-13 09:08:03 +02:00
Lukas Gravley
e8091a4ee9
Merge pull request #827 from PascalBourdier/ignore-kustomize-file 
ignore kustomize file with kubeval
 2020-10-12 10:36:45 -05:00
Lukas Gravley
6bde44e755
Merge pull request #824 from mshimokura/ecrc_file 
editorconfig-checker - Use .ecrc Files
 2020-10-12 10:24:00 -05:00
Michael Shimokura
a5cada70f8 Revert "rename the variable to EDITORCONFIG_CHECKER_FILE_NAME for clarity" 
This reverts commit 23a463867d.
 2020-10-09 09:13:37 -04:00
Michael Shimokura
23a463867d rename the variable to EDITORCONFIG_CHECKER_FILE_NAME for clarity 2020-10-09 09:02:12 -04:00
Pascal Bourdier
32a5945dd8 embedding the negation in the existing if 2020-10-09 11:53:34 +02:00
Pascal Bourdier
d975791bb9 ignore kustomize file with kubeval 
currently, kubeval doesn't support kustomize file

so kubeval returns a false-positive about a missing `metadata` key:
```
2020-10-09 06:19:19 [ERROR ]   Found errors in [kubeval] linter!
2020-10-09 06:19:19 [ERROR ]   [ERR  - .../kustomization.yml: Missing 'metadata' key]
2020-10-09 06:19:19 [ERROR ]   Linter CMD:[kubeval --strict .../kustomization.yml]
```
 2020-10-09 09:02:09 +02:00
Michael Shimokura
cd4798ea04 only assign EDITORCONFIG_FILE_NAME if not already assigned 2020-10-08 16:17:29 -04:00
Michael Shimokura
1312a3a3e4 use the .ecrc file 2020-10-08 15:27:47 -04:00
Tim Jones
a8746a7159 Add support for Terragrunt files 2020-10-08 18:18:22 +02:00
Marco Ferrari
a2b3938ea2 Dynamically load linter rules 2020-10-07 19:02:36 +02:00
Marco Ferrari
68e15659b8 Centralize file list building logic in buildFileList.sh 2020-10-07 16:36:49 +02:00
Marco Ferrari
351496fe72 Populate FILE_ARRAY_DOCKERFILE_HADOLINT 2020-10-03 12:19:33 +02:00
Marco Ferrari
d210896355 Set FILE_ARRAY_EDITORCONFIG 2020-10-03 00:33:01 +02:00
Marco Ferrari
e1b1c7d223 Dynamically initialize FILE_ARRAY variables 2020-10-02 23:02:47 +02:00
Marco Ferrari
973bfdea8e Initialize all log-related ASAP 2020-09-29 22:46:24 +02:00
Marco Ferrari
9371fab670 Remove unneeded variables and eval the rest 2020-09-29 22:33:11 +02:00
Lukas Gravley
18c32b7dca
Merge pull request #766 from mshimokura/editorconfig_lintall 
Lint all changed files with editorconfig-checker
 2020-09-28 08:38:51 -05:00
Lukas Gravley
167af0854e
Merge pull request #767 from kpj/master 
Fix various Snakemake related issues
 2020-09-28 08:36:48 -05:00
Lukas Gravley
6482f45462
Merge pull request #769 from ferrarimarco/remove-read-only-change-flag 
Remove READ_ONLY_CHANGE_FLAG flag and fix .editorconfig and shfmt tests
 2020-09-28 08:35:58 -05:00
Marco Ferrari
d43fcdc666 Sort environment variables when printing debug info 2020-09-26 00:51:53 +02:00
Marco Ferrari
31fd755fd7 Remove unneeded READ_ONLY_CHANGE_FLAG 2020-09-25 23:41:47 +02:00
Marco Ferrari
63f23368b8 Remove unneeded READ_ONLY_CHANGE_FLAG 2020-09-25 21:25:00 +02:00
kpj
9e7c84fbbb Fix various Snakemake related variable names 2020-09-24 16:06:12 +02:00
kpj
40f995365b Fix Snakefile regex 2020-09-24 15:55:47 +02:00
kpj
71ede6ccca Add missing 'GetLinterRules' calls 2020-09-24 15:54:24 +02:00
Michael Shimokura
12543b369b Lint all files with editorconfig-checker 
Since .editorconfig configuration files _could_ apply to any file, we
should pass in the RAW_FILE_ARRAY to it. This ensures that files of all
types are linted by editorconfig-checker.
 2020-09-24 09:02:24 -04:00
Lukas Gravley
84c79a186b
Merge branch 'master' into master 2020-09-22 08:56:09 -05:00
Marco Ferrari
f24f52be11 Lint with Kubeval and fixes 2020-09-22 01:49:01 +02:00
Lukas Gravley
f290145dfa
Update linter.sh 2020-09-21 13:51:46 -05:00
Lukas Gravley
06cb2ebb6f
Update linter.sh 2020-09-21 13:50:58 -05:00
Marco Ferrari
6168112f61 Fix ERROR_ON_MISSING_EXEC_BIT initialization 2020-09-21 14:43:44 +02:00
kpj
6f6004275f In anticipation of snakefmt 0.1.6, start using --check and --compact-diff 2020-09-18 16:32:01 +02:00
Marco Ferrari
5cefb9209f Make bash-exec errors or warnings configurable 2020-09-15 22:40:12 +02:00
NicolasVuillamy
e470df5431 Fix file filters: Reorder arguments to LintCodeBase function 2020-09-15 08:15:53 +02:00
kpj
5b51c2bd92 Use '--compact-diff' instead of '--diff' for snakefmt 2020-09-14 09:36:33 +02:00
Joseph Marino
2698bdfbc3
Fixed a typo in code comments 
Replaced the term "CSS" with "HTML" in code comments for the
HTML_LINTER_RULES variable.
 2020-09-11 15:16:55 -04:00
kpj
11f437df4c Fix usage of FILE_ARRAY_SNAKEMAKE 2020-09-11 13:51:15 +02:00
kpj
e1b2fd6085 Fix bug in Snakemake file regex 2020-09-11 13:49:05 +02:00
kpj
ec0577ae5b Add Snakemake to language array 2020-09-11 13:31:57 +02:00
Lukas Gravley
79b055babe
Merge pull request #707 from ferrarimarco/fix-node-modules 
Fix list files function typos
 2020-09-10 11:21:54 -05:00
Lucas Gravley
b232c5b970 this is the way./.. 2020-09-10 10:34:04 -05:00
Lucas Gravley
f432ef2116 fix spaces 2020-09-10 10:25:56 -05:00
Marco Ferrari
ad9c0081f4 Fix list files function typos 2020-09-10 12:10:12 +02:00
NicolasVuillamy
27afc50d60 Set GROOVY Linter failure level to warning 2020-09-10 11:07:05 +02:00
NicolasVuillamy
c86e90b3d0 Solve conflicts + format 2020-09-09 20:22:32 +02:00
NicolasVuillamy
f072bc5c8d Merge remote-tracking branch 'github/master' 2020-09-09 20:18:21 +02:00
Lukas Gravley
9f3eb7d454
Merge pull request #679 from Goryudyuma/just-filter-the-git-folder 
Just filter the .git folder
 2020-09-09 10:53:19 -05:00
Lucas Gravley
b5d42bf181 this makes no sense 2020-09-09 10:37:02 -05:00
Lucas Gravley
880380d118 if i could only read 2020-09-09 10:18:12 -05:00
Lucas Gravley
dbd4cd673d this has to be right 2020-09-09 10:04:21 -05:00
Lucas Gravley
eb67d9b9c6 fix that dumb action 2020-09-09 09:28:39 -05:00
Lucas Gravley
bae75b456b more fix 2020-09-09 09:24:57 -05:00
Lucas Gravley
17c3ded695 i forgot how this works 2020-09-09 09:24:27 -05:00
Lukas Gravley
e9811c85d6
Update lib/worker.sh 
yes

Co-authored-by: Goryudyuma(Kei.Matsumoto) <6211370+Goryudyuma@users.noreply.github.com>
 2020-09-08 16:00:12 -05:00
Lucas Gravley
fd42f4b3fb science... 2020-09-08 15:45:17 -05:00
Marco Ferrari
83666ffaba Fix getting filename for hidden files 2020-09-08 19:20:49 +02:00
Lucas Gravley
0e5f996c3c look at folders and not file names 2020-09-08 12:16:59 -05:00
Lucas Gravley
a0d4012b67 like this? 2020-09-08 12:01:17 -05:00
Lucas Gravley
53995952e0 Merge branch 'master' into just-filter-the-git-folder 2020-09-08 10:43:59 -05:00
Lucas Gravley
a6c9656015 fixing vars 2020-09-08 09:47:57 -05:00
kpj
6f6e6e9d03 [Snakemake] Remove wrong function argument 2020-09-08 11:26:48 +02:00
kpj
581f07a32b [Snakemake] Fix 'LINTER_NAME' 2020-09-08 10:19:56 +02:00
kpj
8ac1c99a2e [Snakemake] Support both formatting using 'snakefmt' and linting using 'snakemake --lint' 2020-09-08 09:38:48 +02:00
kpj
ad262196ba [Snakemake] Also lint 'Snakefile' (without '.smk' suffix) 2020-09-08 09:11:54 +02:00
kpj
53f551c8b0 [Snakemake] Add '--config' parameter to 'snakefmt' calls 2020-09-07 17:26:58 +02:00
kpj
0c5029bf67 [Snakemake] Actually run 'snakefmt' tests 2020-09-07 17:20:56 +02:00
kpj
1e453be7fa [Snakemake] Update codebase 2020-09-07 16:49:07 +02:00
NicolasVuillamy
04c93b4ff5 Add management of FILTER_REGEX_INCLUDE and FILTER_REGEX_EXCLUDE options 2020-09-05 12:25:44 +02:00
Lukas Gravley
828de134a9
this should be right 2020-09-04 13:22:01 -05:00
Goryudyuma(Kei.Matsumoto)
b31b696e00
Just filter the .git folder 2020-09-05 03:08:26 +09:00
Lukas Gravley
c58bab2627
Merge pull request #677 from v1v/feature/version 
Print version, date and revision
 2020-09-04 10:35:38 -05:00
Lucas Gravley
b29eb851d3 make pretty 2020-09-04 10:14:47 -05:00
Lukas Gravley
a3fcb3ea7c
Merge pull request #675 from dmerrick/honoring-disable-errors 
Making MULTI_STATUS honor DISABLE_ERRORS setting
 2020-09-04 09:15:06 -05:00
Lukas Gravley
eb36fb7d7c
Merge branch 'master' into master 2020-09-04 08:53:34 -05:00
NicolasVuillamy
21d75fb89e Groovy traps .nf extension (nextflow) + upgrade npm-groovy-lint 2020-09-04 11:54:31 +02:00
Victor Martinez
d3c992bec7
Print version, date and revision 2020-09-04 09:09:20 +01:00
Dana Merrick
c64c5c8d60 Cleaner solution 2020-09-03 19:37:10 -04:00
Dana Merrick
dd84550d46 Honoring DISABLE_ERRORS 2020-09-03 19:23:24 -04:00
Lucas Gravley
c4bbf03935 fixing debug 2020-09-03 10:12:29 -05:00
Lucas Gravley
d78e707cba no source needed 2020-09-03 09:57:20 -05:00
Lucas Gravley
a3c8b22e2c fix duplicate names 2020-09-03 09:56:34 -05:00
Lucas Gravley
6ac933dc8c fix print 2020-09-03 09:34:39 -05:00
Lucas Gravley
165b29cbe1 fix array 2020-09-03 09:21:22 -05:00
Lucas Gravley
8a51e59be7 even easier 2020-09-03 09:20:00 -05:00
Lucas Gravley
72fd3e3b87 super simple 2020-09-03 09:12:49 -05:00
Lukas Gravley
b012d72952
Merge pull request #662 from montyly/dev-black-config-file 
Add support for black config file
 2020-09-02 09:57:44 -05:00
Lucas Gravley
f5e39e5aad fix typo and add check 2020-09-02 09:26:01 -05:00
Lucas Gravley
a756e40157 typo 2020-09-02 09:07:39 -05:00
Lucas Gravley
6040030c8a Adding more paths to ignore 2020-09-02 09:05:36 -05:00
Josselin
f34b084586 Add support for black config file 2020-09-02 11:28:57 +02:00
Marco Ferrari
de4b8a4fa0 Add shfmt and fixes back 2020-09-01 00:06:15 +02:00
Marco Ferrari
30763f2575 Streamline shell file list building 2020-08-31 23:47:48 +02:00
Lucas Gravley
98c2eec42a small clean 2020-08-31 14:34:14 -05:00
Marco Ferrari
228a86e5c0 Remove duplicate output lines when checking for ZSH scripts 2020-08-31 19:56:49 +02:00
Marco Ferrari
798311822a Add file path to ZSH warning messages 2020-08-31 19:47:05 +02:00
Marco Ferrari
833dcb8bd8 Don't check zsh files with shfmt 2020-08-31 19:31:22 +02:00
Marco Ferrari
f5331bdcd3 Skip shfmt if no .editorconfig file is present 2020-08-31 19:30:50 +02:00
Marco Ferrari
f90c3a289b Check if report output folder exists before listing 2020-08-31 19:22:50 +02:00
Marco Ferrari
644e69131b Fix shfmt test 2020-08-31 19:22:50 +02:00
Marco Ferrari
b3a980e06f Fix bash-exec and terrascan versions 2020-08-31 19:22:49 +02:00
Marco Ferrari
0d849cd5e0 Lint shell files with shfmt 2020-08-31 19:22:49 +02:00
Lucas Gravley
13e87dd021 lots of cleanup 2020-08-31 11:51:03 -05:00
Lucas Gravley
958f70fe67 its real picky 2020-08-31 10:11:12 -05:00