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Author SHA1 Message Date
dependabot[bot]
6abfa2b339
Bump snakemake from 7.1.0 to 7.2.1 in /dependencies/python (#2637) 
Bumps [snakemake](https://github.com/snakemake/snakemake) from 7.1.0 to 7.2.1.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Changelog](https://github.com/snakemake/snakemake/blob/main/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakemake/compare/v7.1.0...v7.2.1)

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 2022-03-14 10:48:30 -05:00
github-actions[bot]
07b2cc9eab
Update Python dependencies (#2616) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-03-14 08:54:52 -05:00
Super-Linter Automation
71957137ef Update Python dependencies 2022-03-07 10:32:23 -05:00
Super-Linter Automation
27aa4a2bb5 Update Python dependencies 2022-03-01 10:52:09 -05:00
Super-Linter Automation
3403d67934 Update Python dependencies 2022-02-28 09:27:26 -05:00
github-actions[bot]
069df12b17
Update Python dependencies (#2546) 
Co-authored-by: Super-Linter Automation <noreply@github.com>
 2022-02-22 11:21:32 -06:00
dependabot[bot]
12927d1882
Bump markupsafe from 2.0.1 to 2.1.0 in /dependencies/python (#2524) 
Bumps [markupsafe](https://github.com/pallets/markupsafe) from 2.0.1 to 2.1.0.
- [Release notes](https://github.com/pallets/markupsafe/releases)
- [Changelog](https://github.com/pallets/markupsafe/blob/main/CHANGES.rst)
- [Commits](https://github.com/pallets/markupsafe/compare/2.0.1...2.1.0)

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 2022-02-22 08:58:27 -06:00
dependabot[bot]
128512ec69
Bump cpplint from 1.5.5 to 1.6.0 in /dependencies/python (#2527) 
Bumps [cpplint](https://github.com/cpplint/cpplint) from 1.5.5 to 1.6.0.
- [Release notes](https://github.com/cpplint/cpplint/releases)
- [Changelog](https://github.com/cpplint/cpplint/blob/1.6.0/changelog.rst)
- [Commits](https://github.com/cpplint/cpplint/compare/1.5.5...1.6.0)

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 2022-02-22 08:58:18 -06:00
dependabot[bot]
e785cad6fb
Bump sqlfluff from 0.10.0 to 0.10.1 in /dependencies/python (#2528) 
Bumps [sqlfluff](https://github.com/sqlfluff/sqlfluff) from 0.10.0 to 0.10.1.
- [Release notes](https://github.com/sqlfluff/sqlfluff/releases)
- [Changelog](https://github.com/sqlfluff/sqlfluff/blob/main/CHANGELOG.md)
- [Commits](https://github.com/sqlfluff/sqlfluff/compare/0.10.0...0.10.1)

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 2022-02-22 08:58:10 -06:00
dependabot[bot]
8a022dcb7a
Bump jupyter-core from 4.9.1 to 4.9.2 in /dependencies/python (#2530) 
Bumps [jupyter-core](https://jupyter.org) from 4.9.1 to 4.9.2.

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 2022-02-22 08:58:02 -06:00
dependabot[bot]
b0aff67e71
Bump platformdirs from 2.5.0 to 2.5.1 in /dependencies/python (#2531) 
Bumps [platformdirs](https://github.com/platformdirs/platformdirs) from 2.5.0 to 2.5.1.
- [Release notes](https://github.com/platformdirs/platformdirs/releases)
- [Changelog](https://github.com/platformdirs/platformdirs/blob/main/CHANGES.rst)
- [Commits](https://github.com/platformdirs/platformdirs/compare/2.5.0...2.5.1)

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 2022-02-22 08:57:55 -06:00
dependabot[bot]
524c99f161
Bump gitpython from 3.1.26 to 3.1.27 in /dependencies/python (#2532) 
Bumps [gitpython](https://github.com/gitpython-developers/GitPython) from 3.1.26 to 3.1.27.
- [Release notes](https://github.com/gitpython-developers/GitPython/releases)
- [Changelog](https://github.com/gitpython-developers/GitPython/blob/main/CHANGES)
- [Commits](https://github.com/gitpython-developers/GitPython/compare/3.1.26...3.1.27)

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 2022-02-22 08:57:48 -06:00
dependabot[bot]
5aab8c3007
Bump yq from 2.13.0 to 2.14.0 in /dependencies/python (#2533) 
Bumps [yq](https://github.com/kislyuk/yq) from 2.13.0 to 2.14.0.
- [Release notes](https://github.com/kislyuk/yq/releases)
- [Changelog](https://github.com/kislyuk/yq/blob/develop/Changes.rst)
- [Commits](https://github.com/kislyuk/yq/compare/v2.13.0...v2.14.0)

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 2022-02-22 08:57:40 -06:00
Brett Logan
892e5ab2ec Update deps 2022-02-14 13:39:05 -05:00
dependabot[bot]
d07fe87951
Bump sqlfluff from 0.9.1 to 0.9.4 in /dependencies/python (#2425) 
Bumps [sqlfluff](https://github.com/sqlfluff/sqlfluff) from 0.9.1 to 0.9.4.
- [Release notes](https://github.com/sqlfluff/sqlfluff/releases)
- [Changelog](https://github.com/sqlfluff/sqlfluff/blob/main/CHANGELOG.md)
- [Commits](https://github.com/sqlfluff/sqlfluff/compare/0.9.1...0.9.4)

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 2022-01-31 12:02:09 -06:00
dependabot[bot]
f4f0b28d57
Bump boto3 from 1.20.29 to 1.20.41 in /dependencies/python (#2385) 
Bumps [boto3](https://github.com/boto/boto3) from 1.20.29 to 1.20.41.
- [Release notes](https://github.com/boto/boto3/releases)
- [Changelog](https://github.com/boto/boto3/blob/develop/CHANGELOG.rst)
- [Commits](https://github.com/boto/boto3/compare/1.20.29...1.20.41)

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 2022-01-24 10:21:24 -06:00
dependabot[bot]
ac506d8649
Bump botocore from 1.23.29 to 1.23.41 in /dependencies/python (#2381) 
Bumps [botocore](https://github.com/boto/botocore) from 1.23.29 to 1.23.41.
- [Release notes](https://github.com/boto/botocore/releases)
- [Changelog](https://github.com/boto/botocore/blob/develop/CHANGELOG.rst)
- [Commits](https://github.com/boto/botocore/compare/1.23.29...1.23.41)

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 2022-01-24 09:47:52 -06:00
dependabot[bot]
aeaca1dfae
Bump snakemake from 6.12.3 to 6.13.1 in /dependencies/python (#2380) 
Bumps [snakemake](https://github.com/snakemake/snakemake) from 6.12.3 to 6.13.1.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Commits](https://github.com/snakemake/snakemake/compare/v6.12.3...v6.13.1)

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 2022-01-24 09:11:39 -06:00
dependabot[bot]
1368fcd712
Bump pyparsing from 3.0.6 to 3.0.7 in /dependencies/python (#2383) 
Bumps [pyparsing](https://github.com/pyparsing/pyparsing) from 3.0.6 to 3.0.7.
- [Release notes](https://github.com/pyparsing/pyparsing/releases)
- [Changelog](https://github.com/pyparsing/pyparsing/blob/master/CHANGES)
- [Commits](https://github.com/pyparsing/pyparsing/compare/pyparsing_3.0.6...pyparsing_3.0.7)

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 2022-01-24 09:11:28 -06:00
dependabot[bot]
7c69a5609b
Bump regex from 2021.11.10 to 2022.1.18 in /dependencies/python (#2384) 
Bumps [regex](https://github.com/mrabarnett/mrab-regex) from 2021.11.10 to 2022.1.18.
- [Release notes](https://github.com/mrabarnett/mrab-regex/releases)
- [Commits](https://github.com/mrabarnett/mrab-regex/commits)

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 2022-01-24 09:11:19 -06:00
dependabot[bot]
c518cbeb9e
Bump cfn-lint from 0.56.4 to 0.57.0 in /dependencies/python (#2387) 
Bumps [cfn-lint](https://github.com/aws-cloudformation/cfn-python-lint) from 0.56.4 to 0.57.0.
- [Release notes](https://github.com/aws-cloudformation/cfn-python-lint/releases)
- [Changelog](https://github.com/aws-cloudformation/cfn-lint/blob/main/CHANGELOG.md)
- [Commits](https://github.com/aws-cloudformation/cfn-python-lint/compare/v0.56.4...v0.57.0)

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 2022-01-24 09:11:06 -06:00
dependabot[bot]
b4329ed8b9
Bump pygments from 2.11.1 to 2.11.2 in /dependencies/python (#2346) 
Bumps [pygments](https://github.com/pygments/pygments) from 2.11.1 to 2.11.2.
- [Release notes](https://github.com/pygments/pygments/releases)
- [Changelog](https://github.com/pygments/pygments/blob/master/CHANGES)
- [Commits](https://github.com/pygments/pygments/compare/2.11.1...2.11.2)

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 2022-01-18 13:57:32 -06:00
dependabot[bot]
561cc4dd93
Bump mypy from 0.930 to 0.931 in /dependencies/python (#2349) 
Bumps [mypy](https://github.com/python/mypy) from 0.930 to 0.931.
- [Release notes](https://github.com/python/mypy/releases)
- [Commits](https://github.com/python/mypy/compare/v0.930...v0.931)

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 2022-01-18 13:57:24 -06:00
dependabot[bot]
38092dd71e
Bump jsonpickle from 2.0.0 to 2.1.0 in /dependencies/python (#2350) 
Bumps [jsonpickle](https://github.com/jsonpickle/jsonpickle) from 2.0.0 to 2.1.0.
- [Release notes](https://github.com/jsonpickle/jsonpickle/releases)
- [Changelog](https://github.com/jsonpickle/jsonpickle/blob/main/CHANGES.rst)
- [Commits](https://github.com/jsonpickle/jsonpickle/compare/v2.0.0...v2.1.0)

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 2022-01-18 13:57:18 -06:00
dependabot[bot]
aed5376439
Bump gitpython from 3.1.24 to 3.1.26 in /dependencies/python (#2351) 
Bumps [gitpython](https://github.com/gitpython-developers/GitPython) from 3.1.24 to 3.1.26.
- [Release notes](https://github.com/gitpython-developers/GitPython/releases)
- [Changelog](https://github.com/gitpython-developers/GitPython/blob/main/CHANGES)
- [Commits](https://github.com/gitpython-developers/GitPython/compare/3.1.24...3.1.26)

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 2022-01-18 13:57:10 -06:00
dependabot[bot]
d9bcf9724f
Bump rich from 10.16.2 to 11.0.0 in /dependencies/python (#2356) 
Bumps [rich](https://github.com/willmcgugan/rich) from 10.16.2 to 11.0.0.
- [Release notes](https://github.com/willmcgugan/rich/releases)
- [Changelog](https://github.com/Textualize/rich/blob/master/CHANGELOG.md)
- [Commits](https://github.com/willmcgugan/rich/compare/v10.16.2...v11.0.0)

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 2022-01-18 13:56:59 -06:00
dependabot[bot]
0651230a6e Bump pyrsistent from 0.18.0 to 0.18.1 in /dependencies/python 
Bumps [pyrsistent](https://github.com/tobgu/pyrsistent) from 0.18.0 to 0.18.1.
- [Release notes](https://github.com/tobgu/pyrsistent/releases)
- [Changelog](https://github.com/tobgu/pyrsistent/blob/master/CHANGES.txt)
- [Commits](https://github.com/tobgu/pyrsistent/compare/v0.18.0...v0.18.1)

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 2022-01-18 14:08:52 -05:00
dependabot[bot]
7d250fef4c
Bump ansible-lint from 5.3.1 to 5.3.2 in /dependencies/python (#2324) 
Bumps [ansible-lint](https://github.com/ansible-community/ansible-lint) from 5.3.1 to 5.3.2.
- [Release notes](https://github.com/ansible-community/ansible-lint/releases)
- [Commits](https://github.com/ansible-community/ansible-lint/compare/v5.3.1...v5.3.2)

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 2022-01-11 12:47:32 -06:00
dependabot[bot]
af6ad47e4e
Bump enrich from 1.2.6 to 1.2.7 in /dependencies/python (#2325) 
Bumps [enrich](https://github.com/pycontribs/enrich) from 1.2.6 to 1.2.7.
- [Release notes](https://github.com/pycontribs/enrich/releases)
- [Commits](https://github.com/pycontribs/enrich/compare/1.2.6...v1.2.7)

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 2022-01-11 12:47:24 -06:00
dependabot[bot]
a40e12873b
Bump sqlfluff from 0.9.0 to 0.9.1 in /dependencies/python (#2328) 
Bumps [sqlfluff](https://github.com/sqlfluff/sqlfluff) from 0.9.0 to 0.9.1.
- [Release notes](https://github.com/sqlfluff/sqlfluff/releases)
- [Changelog](https://github.com/sqlfluff/sqlfluff/blob/main/CHANGELOG.md)
- [Commits](https://github.com/sqlfluff/sqlfluff/compare/0.9.0...0.9.1)

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 2022-01-11 12:02:43 -06:00
dependabot[bot]
389bae7b66
Bump astroid from 2.9.2 to 2.9.3 in /dependencies/python (#2331) 
Bumps [astroid](https://github.com/PyCQA/astroid) from 2.9.2 to 2.9.3.
- [Release notes](https://github.com/PyCQA/astroid/releases)
- [Changelog](https://github.com/PyCQA/astroid/blob/main/ChangeLog)
- [Commits](https://github.com/PyCQA/astroid/compare/v2.9.2...v2.9.3)

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 2022-01-11 12:02:23 -06:00
dependabot[bot]
9f8a7b56ce
Bump cfn-lint from 0.56.3 to 0.56.4 in /dependencies/python (#2332) 
Bumps [cfn-lint](https://github.com/aws-cloudformation/cfn-python-lint) from 0.56.3 to 0.56.4.
- [Release notes](https://github.com/aws-cloudformation/cfn-python-lint/releases)
- [Changelog](https://github.com/aws-cloudformation/cfn-lint/blob/main/CHANGELOG.md)
- [Commits](https://github.com/aws-cloudformation/cfn-python-lint/compare/v0.56.3...v0.56.4)

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 2022-01-11 12:02:15 -06:00
dependabot[bot]
53ad488764
Bump urllib3 from 1.26.7 to 1.26.8 in /dependencies/python (#2334) 
Bumps [urllib3](https://github.com/urllib3/urllib3) from 1.26.7 to 1.26.8.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/1.26.8/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/1.26.7...1.26.8)

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 2022-01-11 12:01:58 -06:00
Jameel Al-Aziz
7e1683407d Update Dependabot for python virtual envs 
* Simplify virtualenv installation to use multiple requirements files in
  a single directory. This eliminates the packages.txt file and provides
  an easier path to adding new tools in the future. It also allows us to
  simplify the dependenabot configuration as all requirements files are
  in a single directory.
* Update dependabot.yml to point to the new Python dependencies folder.
 2022-01-11 10:05:56 -05:00
Brett Logan
fc6c5b34d9
Use Virtual Environment for Python Deps (#2294) 
* Build static python depenencies

* Address linting

* Fix copy path

* cleaner

* Stage virtual environments

* Update Dockerfile to support virtual environments

* Remove old python builds

* Remove unnecessary RUN step

* Fix merge conflicts

* Remove test checking for PIP packages

We use virtual environments and no longer install the packages
via pip directly in the image. It should be enough that the version
tests check for the existence already and that the version
comes back correctly.

* Remove binary installation of black

* cleaner

* Remove pip

* pretty

Co-authored-by: Admiral Awkbar <admiralawkbar@github.com>
 2022-01-10 15:23:22 -06:00