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Author SHA1 Message Date
dependabot[bot]
b53c0c259e
Bump snakemake from 5.32.0 to 5.32.2 in /dependencies (#1207) 
Bumps [snakemake](https://github.com/snakemake/snakemake) from 5.32.0 to 5.32.2.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Commits](https://github.com/snakemake/snakemake/compare/v5.32.0...v5.32.2)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Zack Koppert <zkoppert@github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-18 10:51:34 -06:00
dependabot[bot]
37230bda04
Bump ini from 1.3.8 to 2.0.0 in /dependencies (#1225) 
Bumps [ini](https://github.com/isaacs/ini) from 1.3.8 to 2.0.0.
- [Release notes](https://github.com/isaacs/ini/releases)
- [Commits](https://github.com/isaacs/ini/compare/v1.3.8...v2.0.0)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-18 10:50:48 -06:00
dependabot[bot]
b2644ac8ec
Bump @typescript-eslint/parser from 3.10.1 to 4.15.1 in /dependencies (#1226) 
Bumps [@typescript-eslint/parser](https://github.com/typescript-eslint/typescript-eslint/tree/HEAD/packages/parser) from 3.10.1 to 4.15.1.
- [Release notes](https://github.com/typescript-eslint/typescript-eslint/releases)
- [Changelog](https://github.com/typescript-eslint/typescript-eslint/blob/master/packages/parser/CHANGELOG.md)
- [Commits](https://github.com/typescript-eslint/typescript-eslint/commits/v4.15.1/packages/parser)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-18 10:50:32 -06:00
dependabot[bot]
a5188f1b2f
Bump snakefmt from 0.3.0 to 0.3.1 in /dependencies (#1228) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.3.0 to 0.3.1.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/0.3.0...0.3.1)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-18 10:43:42 -06:00
dependabot[bot]
9089cd2cd0
Bump golangci/golangci-lint from v1.36.0 to v1.37.0 (#1223) 
Bumps golangci/golangci-lint from v1.36.0 to v1.37.0.

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-18 10:23:01 -06:00
Lukas Gravley
b951bb2fad
only show high and critical (#1229) 
* only show high and critical

* only show high and critical

* only show high and critical
 2021-02-18 10:21:53 -06:00
dependabot[bot]
570a113901
Bump cljkondo/clj-kondo from 2021.01.20-alpine to 2021.02.13-alpine (#1213) 
* Bump cljkondo/clj-kondo from 2021.01.20-alpine to 2021.02.13-alpine

Bumps cljkondo/clj-kondo from 2021.01.20-alpine to 2021.02.13-alpine.

Signed-off-by: dependabot[bot] <support@github.com>

* fix ascii

* fix spacing

* removing non ascii chars

* fixed typo

* fixed typo

* add location

* flaky go

* flaky go

* flaky ansible

* fix groovy

* update

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Admiral Awkbar <admiralawkbar@github.com>
 2021-02-18 09:59:43 -06:00
dependabot[bot]
826f0ea82b
Bump ansible-lint from 5.0.0 to 5.0.1 in /dependencies (#1227) 
Bumps [ansible-lint](https://github.com/ansible-community/ansible-lint) from 5.0.0 to 5.0.1.
- [Release notes](https://github.com/ansible-community/ansible-lint/releases)
- [Commits](https://github.com/ansible-community/ansible-lint/compare/v5.0.0...v5.0.1)

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 2021-02-17 21:31:16 -08:00
Zack Koppert
35e2d160a4
Add trivy scans for container security (#1209) 
* Create trivy.yml

* Add descriptive names

* Add fs mode to catch package.lock issues

* use script to get around timeout

* use script to get around timeout

* set it

* set it

* update deps

* Align with comment style

* fix headeer

* npm audit fix to patch vulnerabilities

Signed-off-by: Zack Koppert <zkoppert@github.com>

Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-17 16:03:30 -06:00
dependabot[bot]
2e8c31622a
Bump actions/stale from v3.0.15 to v3.0.16 (#1189) 
Bumps [actions/stale](https://github.com/actions/stale) from v3.0.15 to v3.0.16.
- [Release notes](https://github.com/actions/stale/releases)
- [Commits](https://github.com/actions/stale/compare/v3.0.15...9d6f46564a515a9ea11e7762ab3957ee58ca50da)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-17 12:17:42 -06:00
dependabot[bot]
46741519da
Bump yoheimuta/protolint from v0.28.1 to v0.28.2 (#1193) 
Bumps yoheimuta/protolint from v0.28.1 to v0.28.2.

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 2021-02-17 12:17:11 -06:00
dependabot[bot]
a107bfe4eb
Bump stylelint-scss from 3.18.0 to 3.19.0 in /dependencies (#1194) 
Bumps [stylelint-scss](https://github.com/kristerkari/stylelint-scss) from 3.18.0 to 3.19.0.
- [Release notes](https://github.com/kristerkari/stylelint-scss/releases)
- [Changelog](https://github.com/kristerkari/stylelint-scss/blob/master/CHANGELOG.md)
- [Commits](https://github.com/kristerkari/stylelint-scss/compare/3.18.0...3.19.0)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-17 11:45:08 -06:00
dependabot[bot]
09af24a4e4
Bump @stoplight/spectral from 5.8.0 to 5.8.1 in /dependencies (#1202) 
Bumps [@stoplight/spectral](https://github.com/stoplightio/spectral) from 5.8.0 to 5.8.1.
- [Release notes](https://github.com/stoplightio/spectral/releases)
- [Changelog](https://github.com/stoplightio/spectral/blob/v5.8.1/CHANGELOG.md)
- [Commits](https://github.com/stoplightio/spectral/compare/v5.8.0...v5.8.1)

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 2021-02-17 11:44:48 -06:00
dependabot[bot]
25602ecf30
Bump asl-validator from 1.9.3 to 1.9.4 in /dependencies (#1190) 
Bumps [asl-validator](https://github.com/ChristopheBougere/asl-validator) from 1.9.3 to 1.9.4.
- [Release notes](https://github.com/ChristopheBougere/asl-validator/releases)
- [Commits](https://github.com/ChristopheBougere/asl-validator/compare/1.9.3...1.9.4)

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 2021-02-17 11:44:30 -06:00
dependabot[bot]
d84e244b71
Bump typescript from 4.1.3 to 4.1.5 in /dependencies (#1203) 
Bumps [typescript](https://github.com/Microsoft/TypeScript) from 4.1.3 to 4.1.5.
- [Release notes](https://github.com/Microsoft/TypeScript/releases)
- [Commits](https://github.com/Microsoft/TypeScript/compare/v4.1.3...v4.1.5)

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 2021-02-17 11:44:02 -06:00
dependabot[bot]
eef18eadca
Bump @coffeelint/cli from 4.1.2 to 4.1.3 in /dependencies (#1214) 
Bumps [@coffeelint/cli](https://github.com/coffeelint/coffeelint) from 4.1.2 to 4.1.3.
- [Release notes](https://github.com/coffeelint/coffeelint/releases)
- [Changelog](https://github.com/coffeelint/coffeelint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/coffeelint/coffeelint/compare/v4.1.2...v4.1.3)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-17 11:07:18 -06:00
dependabot[bot]
2a27cf7c46
Bump eslint-plugin-jest from 24.1.3 to 24.1.5 in /dependencies (#1218) 
Bumps [eslint-plugin-jest](https://github.com/jest-community/eslint-plugin-jest) from 24.1.3 to 24.1.5.
- [Release notes](https://github.com/jest-community/eslint-plugin-jest/releases)
- [Changelog](https://github.com/jest-community/eslint-plugin-jest/blob/master/CHANGELOG.md)
- [Commits](https://github.com/jest-community/eslint-plugin-jest/compare/v24.1.3...v24.1.5)

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-02-17 11:06:40 -06:00
dependabot[bot]
9ba1edab77
Bump stylelint-config-sass-guidelines in /dependencies (#1205) 
Bumps [stylelint-config-sass-guidelines](https://github.com/bjankord/stylelint-config-sass-guidelines) from 7.1.0 to 8.0.0.
- [Release notes](https://github.com/bjankord/stylelint-config-sass-guidelines/releases)
- [Changelog](https://github.com/bjankord/stylelint-config-sass-guidelines/blob/main/CHANGELOG.md)
- [Commits](https://github.com/bjankord/stylelint-config-sass-guidelines/compare/v7.1.0...v8.0.0)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-17 16:29:00 +00:00
dependabot[bot]
e10bb3b2c5
Bump eslint from 7.19.0 to 7.20.0 in /dependencies (#1215) 
Bumps [eslint](https://github.com/eslint/eslint) from 7.19.0 to 7.20.0.
- [Release notes](https://github.com/eslint/eslint/releases)
- [Changelog](https://github.com/eslint/eslint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/eslint/eslint/compare/v7.19.0...v7.20.0)

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-02-17 16:25:47 +00:00
dependabot[bot]
df16129ca7
Bump pylint from 2.6.0 to 2.6.2 in /dependencies (#1219) 
Bumps [pylint](https://github.com/PyCQA/pylint) from 2.6.0 to 2.6.2.
- [Release notes](https://github.com/PyCQA/pylint/releases)
- [Changelog](https://github.com/PyCQA/pylint/blob/master/ChangeLog)
- [Commits](https://github.com/PyCQA/pylint/compare/pylint-2.6.0...pylint-2.6.2)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-17 10:22:51 -06:00
Lukas Gravley
974ab62ea1
fix actions (#1222) 2021-02-17 09:54:21 -06:00
Jeremiah
00c70f4b2c
Update snakefmt to 0.3.0 and black to 20.3 (now supported by snakefmt). (#1212) 
* Update snakefmt to 0.3.0 and black to 20.3 (now suppored by snakefmt).

* Update pipfile for ansible 5.0

* Align pipfile python with Docker alpine image

* Explicitly pin python minor version in dockerfile

* Ansible updates

* Add missing cryptography dependencies

* Eliminate deprecated ansible syntax

* Update expected output for ansible

* Try to add regex to handle test run length

* Yaml doc syntax fixes

* Flailing attempt at tap wildcard

* Catch dynamic output from ansible-lint

* Update regex

* Fix regex statement

* Fix tap output

* Update go error message (issue from master branch)

* Fix regex

* Ansible strikes back

* Fix tap output

* Fix json tap

* Update r tap
 2021-02-17 07:32:40 -06:00
Zack Koppert
6602bf49f9
Delete codeql-analysis.yml 2021-02-12 21:28:14 -08:00
Zack Koppert
732574b1b2
Add code scanning 2021-02-12 21:25:25 -08:00
dependabot[bot]
e7fef748d6
Bump mstruebing/editorconfig-checker from 2.3.1 to 2.3.3 (#1182) 
Bumps mstruebing/editorconfig-checker from 2.3.1 to 2.3.3.

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-03 10:57:39 -06:00
Thorbjörn 'Puggan' Sundragon
3abe0fc5e6
Move FILTER_REGEX_INCLUDE and FILTER_REGEX_EXCLUDE test (#1022) 
* Move FILTER_REGEX_INCLUDE AND FILTER_REGEX_EXCLUDE before checking filetype

* missing continue, and a lint error

Co-authored-by: Marco Ferrari <ferrari.marco@gmail.com>
 2021-02-03 09:52:12 -06:00
dependabot[bot]
e77c41432c
Bump eslint from 7.18.0 to 7.19.0 in /dependencies (#1175) 
Bumps [eslint](https://github.com/eslint/eslint) from 7.18.0 to 7.19.0.
- [Release notes](https://github.com/eslint/eslint/releases)
- [Changelog](https://github.com/eslint/eslint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/eslint/eslint/compare/v7.18.0...v7.19.0)

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-03 09:37:27 -06:00
dependabot[bot]
5d133f2bc5
Bump wata727/tflint from 0.23.1 to 0.24.1 (#1178) 
Bumps wata727/tflint from 0.23.1 to 0.24.1.

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-02-03 09:34:43 -06:00
dependabot[bot]
4a5b3fb04b
Bump yamllint from 1.25.0 to 1.26.0 in /dependencies (#1176) 
Bumps [yamllint](https://github.com/adrienverge/yamllint) from 1.25.0 to 1.26.0.
- [Release notes](https://github.com/adrienverge/yamllint/releases)
- [Changelog](https://github.com/adrienverge/yamllint/blob/master/CHANGELOG.rst)
- [Commits](https://github.com/adrienverge/yamllint/compare/v1.25.0...v1.26.0)

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 2021-02-03 09:31:34 -06:00
dependabot[bot]
c5fef2f884
Bump mvdan/shfmt from v3.2.1 to v3.2.2 (#1173) 
Bumps mvdan/shfmt from v3.2.1 to v3.2.2.

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 2021-02-03 09:31:15 -06:00
JonZeolla
7c36dcdc1a
Fix the default hadolint rule name in the documentation (#1179) 
* Fix default hadolint rule name

* Rename github actions hadolint config in line with the default
 2021-02-03 09:13:02 -06:00
dependabot[bot]
1df69f651f
Bump yoheimuta/protolint from v0.28.0 to v0.28.1 (#1169) 
* Bump yoheimuta/protolint from v0.28.0 to v0.28.1

Bumps yoheimuta/protolint from v0.28.0 to v0.28.1.

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* maybe

* maybe

* use better docker

* use better docker

* use better docker

* use better docker

* use better docker

* use better docker

* fixed it

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Co-authored-by: Admiral Awkbar <admiralawkbar@github.com>
 2021-02-03 09:08:08 -06:00
Zack Koppert
f7482feec2
move back to latest for linting this repo 2021-01-29 22:35:36 -08:00
Zack Koppert
93e067cf82
revert to get order of operations right 
this enables an automated deploy. will reroll in a minute to 3.14.5
 2021-01-29 21:14:18 -08:00
Zack Koppert
469e002c2e
testing versioning (#1171) 
* Synchronize versions for upcoming release potentially addressing #490
 2021-01-29 21:06:59 -08:00
Marco Ferrari
ab8780a58f
Install, configure, and run jscpd. Add missing tests (#1032) 
Co-authored-by: Gabo <gabo.fdc@gmail.com>
Co-authored-by: Matt Desmond <beardofedu@github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-01-27 20:47:34 +01:00
Gabriel Diaz
0eabdb5e06
Update to use clj kondo alpine image (#1165) 
* Update to use clj kondo alpine image

* Fix binary path
 2021-01-27 13:04:35 -06:00
dependabot[bot]
622f70ee65
Bump yoheimuta/protolint from v0.27.0 to v0.28.0 (#1161) 
Bumps yoheimuta/protolint from v0.27.0 to v0.28.0.

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 2021-01-27 12:14:01 -05:00
dependabot[bot]
8072d9c28d
Bump golangci/golangci-lint from v1.35.2 to v1.36.0 (#1164) 
Bumps golangci/golangci-lint from v1.35.2 to v1.36.0.

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 2021-01-27 11:47:58 -05:00
dependabot[bot]
3d33c7b4a2
Bump cfn-lint from 0.44.4 to 0.44.5 in /dependencies (#1162) 
Bumps [cfn-lint](https://github.com/aws-cloudformation/cfn-python-lint) from 0.44.4 to 0.44.5.
- [Release notes](https://github.com/aws-cloudformation/cfn-python-lint/releases)
- [Changelog](https://github.com/aws-cloudformation/cfn-python-lint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/aws-cloudformation/cfn-python-lint/compare/v0.44.4...v0.44.5)

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 2021-01-27 11:18:20 -05:00
dependabot[bot]
f49c5c6a4c
Bump alpine/terragrunt from 0.14.4 to 0.14.5 (#1155) 
Bumps alpine/terragrunt from 0.14.4 to 0.14.5.

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Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-01-25 09:29:29 -06:00
dependabot[bot]
b50d9ee298
Bump actions/stale from v3.0.14 to v3.0.15 (#1159) 
Bumps [actions/stale](https://github.com/actions/stale) from v3.0.14 to v3.0.15.
- [Release notes](https://github.com/actions/stale/releases)
- [Commits](https://github.com/actions/stale/compare/v3.0.14...86561461b92875de77a8b2d2e75f004c826e8f45)

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 2021-01-25 09:29:09 -06:00
dependabot[bot]
92a871ae3d
Bump snakefmt from 0.2.5 to 0.2.6 in /dependencies (#1160) 
Bumps [snakefmt](https://github.com/snakemake/snakefmt) from 0.2.5 to 0.2.6.
- [Release notes](https://github.com/snakemake/snakefmt/releases)
- [Changelog](https://github.com/snakemake/snakefmt/blob/master/CHANGELOG.md)
- [Commits](https://github.com/snakemake/snakefmt/compare/0.2.5...0.2.6)

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 2021-01-25 09:28:48 -06:00
Ishan Goel
c9471d70eb
Linter command output on newline (#1146) 
When lint fails, print command output on a newline surrounded by "------"

Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
Co-authored-by: Gabriel Diaz <gabo.fdc@gmail.com>
 2021-01-20 12:44:30 -06:00
dependabot[bot]
3c13a589f6
Bump stylelint from 13.8.0 to 13.9.0 in /dependencies (#1151) 
Bumps [stylelint](https://github.com/stylelint/stylelint) from 13.8.0 to 13.9.0.
- [Release notes](https://github.com/stylelint/stylelint/releases)
- [Changelog](https://github.com/stylelint/stylelint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/stylelint/stylelint/compare/13.8.0...13.9.0)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-01-20 12:44:05 -06:00
dependabot[bot]
78f0c474e6
Bump cfn-lint from 0.44.3 to 0.44.4 in /dependencies (#1152) 
Bumps [cfn-lint](https://github.com/aws-cloudformation/cfn-python-lint) from 0.44.3 to 0.44.4.
- [Release notes](https://github.com/aws-cloudformation/cfn-python-lint/releases)
- [Changelog](https://github.com/aws-cloudformation/cfn-python-lint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/aws-cloudformation/cfn-python-lint/compare/v0.44.3...v0.44.4)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2021-01-20 12:43:46 -06:00
dependabot[bot]
a330f399c2
Bump eslint-config-prettier from 7.1.0 to 7.2.0 in /dependencies (#1148) 
Bumps [eslint-config-prettier](https://github.com/prettier/eslint-config-prettier) from 7.1.0 to 7.2.0.
- [Release notes](https://github.com/prettier/eslint-config-prettier/releases)
- [Changelog](https://github.com/prettier/eslint-config-prettier/blob/main/CHANGELOG.md)
- [Commits](https://github.com/prettier/eslint-config-prettier/compare/v7.1.0...v7.2.0)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-01-19 13:48:45 -06:00
dependabot[bot]
d54cd646d6
Bump snakemake from 5.31.1 to 5.32.0 in /dependencies (#1145) 
Bumps [snakemake](https://github.com/snakemake/snakemake) from 5.31.1 to 5.32.0.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Commits](https://github.com/snakemake/snakemake/compare/v5.31.1...v5.32.0)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-01-19 13:21:26 -06:00
dependabot[bot]
120749da99
Bump eslint from 7.17.0 to 7.18.0 in /dependencies (#1143) 
Bumps [eslint](https://github.com/eslint/eslint) from 7.17.0 to 7.18.0.
- [Release notes](https://github.com/eslint/eslint/releases)
- [Changelog](https://github.com/eslint/eslint/blob/master/CHANGELOG.md)
- [Commits](https://github.com/eslint/eslint/compare/v7.17.0...v7.18.0)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Lukas Gravley <admiralawkbar@github.com>
 2021-01-19 13:21:00 -06:00
Lukas Gravley
e11786a54c
Adding Flag for Possum (#1149) 
* adding a bad feature

* fix hadolint
 2021-01-19 11:03:14 -06:00