Commit graph

2922 commits

Author SHA1 Message Date
Lukas Gravley
440e79cf54
Merge pull request #952 from github/dependabot/github_actions/actions/checkout-v2.3.4
Bump actions/checkout from v2.3.3 to v2.3.4
2020-11-04 09:58:58 -06:00
Lukas Gravley
a3d5b373be
Merge pull request #941 from github/streamline-linter-versions
Use the already-defined linter names array to print linter versions
2020-11-04 09:58:45 -06:00
Marco Ferrari
c01d0bc870 Update bug issue template with logging instructions 2020-11-04 14:33:42 +01:00
Marco Ferrari
301afc458a Fix command output echo text 2020-11-04 14:18:45 +01:00
Marco Ferrari
aca43d0206 Fix SC2128 2020-11-04 10:26:09 +01:00
Marco Ferrari
c0441b2844 Use the already-defined linter names array to print linter versions 2020-11-04 10:26:05 +01:00
dependabot[bot]
98b7f4a5eb
Bump snakemake from 5.27.3 to 5.27.4 in /dependencies
Bumps [snakemake](https://github.com/snakemake/snakemake) from 5.27.3 to 5.27.4.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Commits](https://github.com/snakemake/snakemake/compare/v5.27.3...v5.27.4)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-04 05:54:09 +00:00
dependabot[bot]
134c891be0
Bump actions/checkout from v2.3.3 to v2.3.4
Bumps [actions/checkout](https://github.com/actions/checkout) from v2.3.3 to v2.3.4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](https://github.com/actions/checkout/compare/v2.3.3...5a4ac9002d0be2fb38bd78e4b4dbde5606d7042f)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-04 05:43:17 +00:00
Lukas Gravley
49b9b28c00
Merge pull request #950 from github/LinterRules
fixing logic
2020-11-03 10:24:05 -06:00
Lucas Gravley
2c9f8b1aa2 fixing logic 2020-11-03 10:06:33 -06:00
Lukas Gravley
bdc7aa6a1a
Merge pull request #946 from github/dependabot/npm_and_yarn/dependencies/stoplight/spectral-5.7.1
Bump @stoplight/spectral from 5.7.0 to 5.7.1 in /dependencies
2020-11-03 08:07:39 -06:00
Lukas Gravley
3c19db577f
Merge pull request #945 from github/dependabot/docker/golangci/golangci-lint-v1.32.2
Bump golangci/golangci-lint from v1.32.1 to v1.32.2
2020-11-03 08:07:24 -06:00
Lukas Gravley
6da2db74de
Merge pull request #944 from github/dependabot/github_actions/actions/stale-v3.0.13
Bump actions/stale from v3.0.12 to v3.0.13
2020-11-03 08:07:05 -06:00
Lukas Gravley
1cef65ea57
Merge pull request #940 from github/fail-on-missing-linter-version
Fail on errors while getting linter versions
2020-11-03 08:06:05 -06:00
dependabot[bot]
4902217725
Bump @stoplight/spectral from 5.7.0 to 5.7.1 in /dependencies
Bumps [@stoplight/spectral](https://github.com/stoplightio/spectral) from 5.7.0 to 5.7.1.
- [Release notes](https://github.com/stoplightio/spectral/releases)
- [Changelog](https://github.com/stoplightio/spectral/blob/develop/CHANGELOG.md)
- [Commits](https://github.com/stoplightio/spectral/compare/v5.7.0...v5.7.1)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-03 05:50:56 +00:00
dependabot[bot]
e12f6c0d81
Bump golangci/golangci-lint from v1.32.1 to v1.32.2
Bumps golangci/golangci-lint from v1.32.1 to v1.32.2.

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-03 05:48:12 +00:00
dependabot[bot]
8c4f89ee26
Bump actions/stale from v3.0.12 to v3.0.13
Bumps [actions/stale](https://github.com/actions/stale) from v3.0.12 to v3.0.13.
- [Release notes](https://github.com/actions/stale/releases)
- [Commits](https://github.com/actions/stale/compare/v3.0.12...af4072615903a8b031f986d25b1ae3bf45ec44d4)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-03 05:45:43 +00:00
Marco Ferrari
3911130038 Fail on errors while getting linter versions 2020-11-02 21:54:26 +01:00
Lukas Gravley
5a04bd9875
Merge pull request #927 from github/fix-secondary-rules-file
Don't override the secondary rules file path if available, don't reuse dirty values from previous iterations when loading rules files
2020-11-02 08:58:06 -06:00
Lukas Gravley
892a349373
Merge pull request #934 from github/dependabot/npm_and_yarn/dependencies/standard-16.0.1
Bump standard from 15.0.1 to 16.0.1 in /dependencies
2020-11-02 08:55:19 -06:00
Lukas Gravley
11473dafa7
Merge pull request #933 from github/dependabot/docker/mvdan/shfmt-v3.2.0
Bump mvdan/shfmt from v3.1.2 to v3.2.0
2020-11-02 08:46:52 -06:00
Lukas Gravley
46328af6f1
Merge pull request #935 from github/dependabot/npm_and_yarn/dependencies/stoplight/spectral-5.7.0
Bump @stoplight/spectral from 5.6.0 to 5.7.0 in /dependencies
2020-11-02 08:38:46 -06:00
Lukas Gravley
3ca3773fc4
Merge pull request #932 from github/dependabot/docker/golangci/golangci-lint-v1.32.1
Bump golangci/golangci-lint from v1.32.0 to v1.32.1
2020-11-02 08:13:54 -06:00
Lukas Gravley
516e49ad1c
Merge pull request #936 from github/dependabot/pip/dependencies/snakemake-5.27.3
Bump snakemake from 5.26.1 to 5.27.3 in /dependencies
2020-11-02 08:12:58 -06:00
Lukas Gravley
97e9df68dc
Merge pull request #929 from GaboFDC/gf_better_validate_pwshmodule
Better pwsh module validation
2020-11-02 08:11:45 -06:00
Lucas Gravley
3c911cfe99 make fatal 2020-11-02 07:46:58 -06:00
dependabot[bot]
dbf161f0f2
Bump snakemake from 5.26.1 to 5.27.3 in /dependencies
Bumps [snakemake](https://github.com/snakemake/snakemake) from 5.26.1 to 5.27.3.
- [Release notes](https://github.com/snakemake/snakemake/releases)
- [Commits](https://github.com/snakemake/snakemake/compare/v5.26.1...v5.27.3)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-02 06:27:04 +00:00
dependabot[bot]
7caa3b15ee
Bump @stoplight/spectral from 5.6.0 to 5.7.0 in /dependencies
Bumps [@stoplight/spectral](https://github.com/stoplightio/spectral) from 5.6.0 to 5.7.0.
- [Release notes](https://github.com/stoplightio/spectral/releases)
- [Changelog](https://github.com/stoplightio/spectral/blob/develop/CHANGELOG.md)
- [Commits](https://github.com/stoplightio/spectral/compare/v5.6.0...v5.7.0)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-02 06:15:25 +00:00
dependabot[bot]
ebb4012331
Bump standard from 15.0.1 to 16.0.1 in /dependencies
Bumps [standard](https://github.com/standard/standard) from 15.0.1 to 16.0.1.
- [Release notes](https://github.com/standard/standard/releases)
- [Changelog](https://github.com/standard/standard/blob/master/CHANGELOG.md)
- [Commits](https://github.com/standard/standard/compare/v15.0.1...v16.0.1)

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-02 06:14:33 +00:00
dependabot[bot]
6b9b4ed22a
Bump mvdan/shfmt from v3.1.2 to v3.2.0
Bumps mvdan/shfmt from v3.1.2 to v3.2.0.

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-02 06:11:22 +00:00
dependabot[bot]
f9e8719b9d
Bump golangci/golangci-lint from v1.32.0 to v1.32.1
Bumps golangci/golangci-lint from v1.32.0 to v1.32.1.

Signed-off-by: dependabot[bot] <support@github.com>
2020-11-02 06:10:54 +00:00
Gabo
95ca6f0006 Fix shellchekc for linter versions 2020-10-30 20:43:54 -05:00
Gabo
cc5556514f Fix shellcheck 2020-10-30 20:27:20 -05:00
Gabo
f826ac73c5 Validation should be inside container 2020-10-30 19:57:35 -05:00
Gabo
291489d6d9 Fix logging level for automation scripts 2020-10-30 19:09:54 -05:00
Gabo
e4b007cd40 Move validation to build time 2020-10-30 15:06:12 -05:00
Gabo
87036c3987 Better pswh module validation 2020-10-30 14:16:21 -05:00
Lukas Gravley
7f15e7a441
Merge branch 'master' into fix-secondary-rules-file 2020-10-30 10:25:58 -05:00
Lukas Gravley
da41dfe6fb
Merge pull request #922 from GaboFDC/gf_better_log
Add notice, warn and error log levels
2020-10-30 10:24:22 -05:00
Lukas Gravley
3ff1990cab
Merge pull request #924 from github/dependabot/npm_and_yarn/dependencies/tekton-lint-0.5.2
Bump tekton-lint from 0.5.1 to 0.5.2 in /dependencies
2020-10-30 10:22:40 -05:00
Marco Ferrari
377d78981c Fallback to other key servers if ha.pool.sks-keyservers.net is not available 2020-10-30 14:22:35 +01:00
Marco Ferrari
e2f45db57d Initialize the LANGUAGE_LINTER_RULES value to avoid using leftovers from the previous iteration 2020-10-30 12:47:09 +01:00
Marco Ferrari
888bc7524e Don't override the secondary rules file path, if available 2020-10-30 12:15:16 +01:00
dependabot[bot]
c28a3a4362
Bump tekton-lint from 0.5.1 to 0.5.2 in /dependencies
Bumps [tekton-lint](https://github.com/IBM/tekton-lint) from 0.5.1 to 0.5.2.
- [Release notes](https://github.com/IBM/tekton-lint/releases)
- [Commits](https://github.com/IBM/tekton-lint/compare/v0.5.1...v0.5.2)

Signed-off-by: dependabot[bot] <support@github.com>
2020-10-29 05:50:57 +00:00
Gabo
997cfdcb02 Add notice warn and error log levels 2020-10-28 19:08:01 -05:00
Gabo
26fb7bf8d3 update readme 2020-10-28 19:07:35 -05:00
Lukas Gravley
7ed2bbc699
Merge pull request #917 from github/dependabot/npm_and_yarn/dependencies/standard-15.0.1
Bump standard from 15.0.0 to 15.0.1 in /dependencies
2020-10-28 13:25:26 -05:00
Lukas Gravley
91d5a9aeac
Merge pull request #918 from github/dependabot/npm_and_yarn/dependencies/eslint-config-prettier-6.15.0
Bump eslint-config-prettier from 6.14.0 to 6.15.0 in /dependencies
2020-10-28 13:25:13 -05:00
Lukas Gravley
47315743c7
Merge pull request #920 from github/Isort
Isort
2020-10-28 13:24:58 -05:00
Lucas Gravley
ccafee7817 fix tests 2020-10-28 12:50:33 -05:00