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fix(R linting): try installing the R package before linting R language (#1911)

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* fix(R linting): try installing the R package before linting R language

* the tool used to lint the R language gives false positives for files inside an R library, which is not installed
* this change tries to naively install the package in the linted directory

Resolves #1910

* fix code

* fixed it

* fixed it

Co-authored-by: Admiral Awkbar <admiralawkbar@github.com>
This commit is contained in:
Konrad Pagacz 2021-10-05 15:46:38 +02:00 committed by GitHub
parent fafdcd214e
commit a2193cb9f6
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GPG key ID: 4AEE18F83AFDEB23
2 changed files with 54 additions and 1 deletions
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53
lib/functions/detectFiles.sh
View file

@ -437,4 +437,57 @@ function RunAdditionalInstalls() {
done
fi
fi
###############################
# Run installs for R language #
###############################
if [ "${VALIDATE_R}" == "true" ] && [ "${#FILE_ARRAY_R[@]}" -ne 0 ]; then
info "Detected R Language files to lint."
info "Trying to install the R package inside:[${WORKSPACE_PATH}]"
#########################
# Run the build command #
#########################
BUILD_CMD=$(R CMD build "${WORKSPACE_PATH}" 2>&1)
##############
# Error code #
##############
ERROR_CODE=$?
##############################
# Check the shell for errors #
##############################
if [ "${ERROR_CODE}" -ne 0 ]; then
# Error
warn "ERROR! Failed to run:[R CMD build] at location:[${WORKSPACE_PATH}]"
warn "BUILD_CMD:[${BUILD_CMD}]"
else
# Get the build package
BUILD_PKG=$(
cd "${WORKSPACE_PATH}" || exit 0
echo *.tar.gz 2>&1
)
##############################
# Install the build packages #
##############################
INSTALL_CMD=$(
cd "${WORKSPACE_PATH}" || exit 0
R CMD INSTALL "${BUILD_PKG}" 2>&1
)
##############
# Error code #
##############
ERROR_CODE=$?
##############################
# Check the shell for errors #
##############################
if [ "${ERROR_CODE}" -ne 0 ]; then
# Error
warn "ERROR: Failed to install the build package at:[${BUILD_PKG}]"
warn "INSTALL_CMD:[${INSTALL_CMD}]"
fi
fi
fi
}

2
lib/functions/worker.sh
View file

@ -10,7 +10,7 @@
################################################################################
#### Function LintCodebase #####################################################
function LintCodebase() {
# Call comes thorugh as:
# Call comes through as:
# LintCodebase "${LANGUAGE}" "${LINTER_NAME}" "${LINTER_COMMAND}" "${FILTER_REGEX_INCLUDE}" "${FILTER_REGEX_EXCLUDE}" "${TEST_CASE_RUN}" "${!LANGUAGE_FILE_ARRAY}"
####################
# Pull in the vars #