diff --git a/dependencies/Pipfile.lock b/dependencies/Pipfile.lock
index 23fff512..9a49feb8 100644
--- a/dependencies/Pipfile.lock
+++ b/dependencies/Pipfile.lock
@@ -55,11 +55,11 @@
         },
         "aws-sam-translator": {
             "hashes": [
-                "sha256:1a3fd8e48a745967e8457b9cefdc3ad0f139ac4a25af4db9c13a9e1c19ea6910",
-                "sha256:3a200e6475f11726732b9b9c070ca4d58d2fe5ecc40e8fb629b09a053fba5640",
-                "sha256:de2f1b4efd83347639eb19fea37989e9da9a3c59da277320cf1e58a2f0ff6dd0"
+                "sha256:11675c9a84c33543adc31d57d3a679bfdbd0b8dc4d07ec3923560a0c42d4ff4b",
+                "sha256:3258122f4cd671ba3dc141382dd0412c123db9f1317bed8b26e7229f63634454",
+                "sha256:d1901bd6e382e27bfad03ca151a3cccc782796ec48ed7bf34660517ce44284a6"
             ],
-            "version": "==1.26.0"
+            "version": "==1.27.0"
         },
         "black": {
             "hashes": [
@@ -71,17 +71,17 @@
         },
         "boto3": {
             "hashes": [
-                "sha256:79e95f428c485ea817969a78e77a311d2ec4d82e0955639d6126189c990ddad3",
-                "sha256:d8ca27ee13deeb1a9e79f2fe5f923effa60947ed49bbdfbc2a9f5790aef64217"
+                "sha256:7e22c4e21533d7c532e0136610b9cc45e3f81e57b738ff434a1f3d0a3b16e05e",
+                "sha256:87dc624a46b8b0458ca68f0670717aaa9f25a56f60bd8996199573bceb6a747f"
             ],
-            "version": "==1.14.60"
+            "version": "==1.15.2"
         },
         "botocore": {
             "hashes": [
-                "sha256:193f193a66ac79106725e14dd73e28ed36bcec99b37156538a2202d061056a58",
-                "sha256:e55a4fc652537f5ccb2362133f3928ebeafb04ee9fe15ea11c2df80ba4ef8a12"
+                "sha256:4893d51caedaf3ebe84c33ca428d2f4bef257384b8ceff2f4a478f016475d32c",
+                "sha256:7fcfc20921de61bd015d363226476c6f51f38846c2a93f67ee7c70b66f54e223"
             ],
-            "version": "==1.17.60"
+            "version": "==1.18.2"
         },
         "certifi": {
             "hashes": [
@@ -92,11 +92,11 @@
         },
         "cfn-lint": {
             "hashes": [
-                "sha256:98c7e2c2846df779f1a878e76f3eb7a3f40dd7b7dd316e5673c4923cf2ed121e",
-                "sha256:cbf0ef2946c544db347874e36cf4c1a099c432280d62da9b9c739914668aec80"
+                "sha256:101bf9024aa11fb5098d1b00c885b01cfefd5cf51e334c05519595873863c026",
+                "sha256:78518d3b80bf4011d8365228a7b53706b5072ae6dbf8efc0049314e4f2f513d4"
             ],
             "index": "pypi",
-            "version": "==0.35.1"
+            "version": "==0.36.1"
         },
         "chardet": {
             "hashes": [
@@ -159,12 +159,11 @@
         },
         "docutils": {
             "hashes": [
-                "sha256:6c4f696463b79f1fb8ba0c594b63840ebd41f059e92b31957c46b74a4599b6d0",
-                "sha256:9e4d7ecfc600058e07ba661411a2b7de2fd0fafa17d1a7f7361cd47b1175c827",
-                "sha256:a2aeea129088da402665e92e0b25b04b073c04b2dce4ab65caaa38b7ce2e1a99"
+                "sha256:0c5b78adfbf7762415433f5515cd5c9e762339e23369dbe8000d84a4bf4ab3af",
+                "sha256:c2de3a60e9e7d07be26b7f2b00ca0309c207e06c100f9cc2a94931fc75a478fc"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
-            "version": "==0.15.2"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==0.16"
         },
         "flake8": {
             "hashes": [
@@ -215,18 +214,18 @@
         },
         "isort": {
             "hashes": [
-                "sha256:171c5f365791073426b5ed3a156c2081a47f88c329161fd28228ff2da4c97ddb",
-                "sha256:ba91218eee31f1e300ecc079ef0c524cea3fc41bfbb979cbdf5fd3a889e3cfed"
+                "sha256:6187a9f1ce8784cbc6d1b88790a43e6083a6302f03e9ae482acc0f232a98c843",
+                "sha256:c16eaa7432a1c004c585d79b12ad080c6c421dd18fe27982ca11f95e6898e432"
             ],
             "markers": "python_version >= '3.6' and python_version < '4.0'",
-            "version": "==5.5.2"
+            "version": "==5.5.3"
         },
         "jmespath": {
             "hashes": [
                 "sha256:b85d0567b8666149a93172712e68920734333c0ce7e89b78b3e987f71e5ed4f9",
                 "sha256:cdf6525904cc597730141d61b36f2e4b8ecc257c420fa2f4549bac2c2d0cb72f"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
+            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==0.10.0"
         },
         "jsonpatch": {
@@ -376,21 +375,22 @@
                 "sha256:c203ec8783bf771a155b207279b9bccb8dea02d8f0c9e5f8ead507bc3246ecc1",
                 "sha256:ef9d7589ef3c200abe66653d3f1ab1033c3c419ae9b9bdb1240a85b024efc88b"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
+            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.4.7"
         },
         "pyrsistent": {
             "hashes": [
-                "sha256:28669905fe725965daa16184933676547c5bb40a5153055a8dee2a4bd7933ad3"
+                "sha256:2e636185d9eb976a18a8a8e96efce62f2905fea90041958d8cc2a189756ebf3e"
             ],
-            "version": "==0.16.0"
+            "markers": "python_version >= '3.5'",
+            "version": "==0.17.3"
         },
         "python-dateutil": {
             "hashes": [
                 "sha256:73ebfe9dbf22e832286dafa60473e4cd239f8592f699aa5adaf10050e6e1823c",
                 "sha256:75bb3f31ea686f1197762692a9ee6a7550b59fc6ca3a1f4b5d7e32fb98e2da2a"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2'",
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.8.1"
         },
         "pyyaml": {
@@ -463,7 +463,7 @@
                 "sha256:30639c035cdb23534cd4aa2dd52c3bf48f06e5f4a941509c8bafd8ce11080259",
                 "sha256:8b74bedcbbbaca38ff6d7491d76f2b06b3592611af620f8426e82dddb04a5ced"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2'",
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.15.0"
         },
         "smmap": {
@@ -476,18 +476,19 @@
         },
         "snakefmt": {
             "hashes": [
-                "sha256:a394a202311c3f244f7f822f4ffa262972f97d117bd290faa3815065896fd923",
-                "sha256:e50c09202bab30451dc459df15da8254f26c7829572eca2831025593385467fa"
+                "sha256:6dfd5f82ae9799c359776079fef37f2dfb582ff1653ca25095c6a4083338dc51",
+                "sha256:ec3f97feb69df2dcda2d63de145e561db9a3be97ae015b7159332560e13a1e9b"
             ],
             "index": "pypi",
-            "version": "==0.1.5"
+            "version": "==0.2.0"
         },
         "snakemake": {
             "hashes": [
-                "sha256:1a66eff7fcbc90a1d01749f071492a417d2ad94daccc6003f6f5d0ece0b98860"
+                "sha256:6e9ba39038c0d64a6bba492e1646dda10f4826bd905a8b2aa93b18a6793b098b",
+                "sha256:b3060be5a7a88bf9e1b39e62315e8c06a831706f1a8a8883f83a49de0ab2c767"
             ],
             "index": "pypi",
-            "version": "==5.24.0"
+            "version": "==5.25.0"
         },
         "toml": {
             "hashes": [