From 581f07a32b49afcadbcd66693c6cde8b0ba102a4 Mon Sep 17 00:00:00 2001
From: kpj <kpjkpjkpjkpjkpjkpj@gmail.com>
Date: Tue, 8 Sep 2020 10:19:56 +0200
Subject: [PATCH] [Snakemake] Fix 'LINTER_NAME'

---
 lib/linter.sh | 2 +-
 lib/worker.sh | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/lib/linter.sh b/lib/linter.sh
index 1c56e9cc..7f6710db 100755
--- a/lib/linter.sh
+++ b/lib/linter.sh
@@ -1859,7 +1859,7 @@ if [ "${VALIDATE_SNAKEMAKE_LINT}" == "true" ]; then
   # Lint the files with snakefmt #
   ################################
   # LintCodebase "FILE_TYPE" "LINTER_NAME" "LINTER_CMD" "FILE_TYPES_REGEX" "FILE_ARRAY"
-  LintCodebase "SNAKEMAKE_LINT" "snakemake --lint" "snakemake --lint -s" ".*\.\(smk\)\$" "\(Snakefile|.*\.smk\)\$" "${FILE_ARRAY_SNAKEMAKE[@]}"
+  LintCodebase "SNAKEMAKE_LINT" "snakemake" "snakemake --lint -s" ".*\.\(smk\)\$" "\(Snakefile|.*\.smk\)\$" "${FILE_ARRAY_SNAKEMAKE[@]}"
 fi
 
 ######################
diff --git a/lib/worker.sh b/lib/worker.sh
index 4b760aed..7bfd8751 100755
--- a/lib/worker.sh
+++ b/lib/worker.sh
@@ -702,7 +702,7 @@ function RunTestCases() {
   TestCodebase "RAKU" "raku" "raku -c" ".*\.\(raku\|rakumod\|rakutest\|pm6\|pl6\|p6\)\$" "raku"
   TestCodebase "RUBY" "rubocop" "rubocop -c ${RUBY_LINTER_RULES}" ".*\.\(rb\)\$" "ruby"
   TestCodebase "SHELL_SHFMT" "shfmt" "shfmt -d" ".*\.\(sh\|bash\|dash\|ksh\)\$" "shell_shfmt"
-  TestCodebase "SNAKEMAKE_LINT" "snakemake --lint" "snakemake --lint -s" ".*\.\(smk\)\$" "snakemake"
+  TestCodebase "SNAKEMAKE_LINT" "snakemake" "snakemake --lint -s" ".*\.\(smk\)\$" "snakemake"
   TestCodebase "SNAKEMAKE_SNAKEFMT" "snakefmt" "snakefmt --config ${SNAKEMAKE_SNAKEFMT_LINTER_RULES} --diff" ".*\.\(smk\)\$" "snakemake"
   TestCodebase "STATES" "asl-validator" "asl-validator --json-path" ".*\.\(json\)\$" "states"
   TestCodebase "SQL" "sql-lint" "sql-lint --config ${SQL_LINTER_RULES}" ".*\.\(sql\)\$" "sql"